RNA–Protein interactions for RNA: ENST00000506820.1

AFP-203, Transcript of alpha fetoprotein, humanhuman

TSL 2

Gene AFP, Length 476 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-203ENST00000506820 AEBP2Q6ZN18 517 aaPredicted RBP20.63■□□□□ 0.89
AFP-203ENST00000506820 CHIC1Q5VXU3 224 aa19.98■□□□□ 0.79
AFP-203ENST00000506820 SENP3Q9H4L4 574 aaPredicted RBP17.75■□□□□ 0.43
AFP-203ENST00000506820 PHF23Q9BUL5 403 aaPredicted RBP17.5■□□□□ 0.39
AFP-203ENST00000506820 FOXD1Q16676 465 aa16.39■□□□□ 0.21
AFP-203ENST00000506820 PLPPR3Q6T4P5 718 aa16.19■□□□□ 0.18
AFP-203ENST00000506820 POTEDQ86YR6 584 aa16.17■□□□□ 0.18
AFP-203ENST00000506820 ADRA2BP18089 450 aa15.51■□□□□ 0.07
AFP-203ENST00000506820 PPP6R1Q9UPN7 881 aa15.49■□□□□ 0.07
AFP-203ENST00000506820 PIAS4Q8N2W9 510 aaPredicted RBP15.47■□□□□ 0.07
AFP-203ENST00000506820 MSH5O43196 834 aa15.38■□□□□ 0.05
AFP-203ENST00000506820 SCAF1Q9H7N4 1312 aaKnown RBP14.41□□□□□ -0.1
AFP-203ENST00000506820 PPP4R3CPQ6ZMV5 832 aa14.17□□□□□ -0.14
AFP-203ENST00000506820 MAPK8IP2Q13387 824 aaPredicted RBP14.13□□□□□ -0.15
AFP-203ENST00000506820 DMRT2Q9Y5R5 561 aa14.06□□□□□ -0.16
AFP-203ENST00000506820 CNKSR2Q8WXI2 1034 aa13.88□□□□□ -0.19
AFP-203ENST00000506820 NCBP3Q53F19 620 aaKnown RBP13.85□□□□□ -0.19
AFP-203ENST00000506820 RNF216Q9NWF9 866 aaPredicted RBP13.67□□□□□ -0.22
AFP-203ENST00000506820 HOXD11P31277 338 aaPredicted RBP13.65□□□□□ -0.22
AFP-203ENST00000506820 DCAF8L1A6NGE4 600 aa13.57□□□□□ -0.24
AFP-203ENST00000506820 NPM3O75607 178 aaKnown RBP13.48□□□□□ -0.25
AFP-203ENST00000506820 KCNA4P22459 653 aa13.43□□□□□ -0.26
AFP-203ENST00000506820 CACNB1Q02641 598 aaPredicted RBP13.27□□□□□ -0.29
AFP-203ENST00000506820 DNAJC5BQ9UF47 199 aa13.19□□□□□ -0.3
AFP-203ENST00000506820 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.11□□□□□ -0.31
AFP-203ENST00000506820 RNF39Q9H2S5 420 aa13.05□□□□□ -0.32
AFP-203ENST00000506820 C1QBPQ07021 282 aaKnown RBP12.96□□□□□ -0.33
AFP-203ENST00000506820 SLC4A1APQ9BWU0 796 aaKnown RBP12.84□□□□□ -0.35
AFP-203ENST00000506820 SLC4A2P04920 1241 aa12.73□□□□□ -0.37
AFP-203ENST00000506820 U3KPZ7 1027 aaPredicted RBP12.73□□□□□ -0.37
AFP-203ENST00000506820 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.68□□□□□ -0.38
AFP-203ENST00000506820 HNRNPUL2Q1KMD3 747 aaKnown RBP12.68□□□□□ -0.38
AFP-203ENST00000506820 APLP2Q06481 763 aa12.67□□□□□ -0.38
AFP-203ENST00000506820 SAMD1Q6SPF0 538 aaPredicted RBP12.56□□□□□ -0.4
AFP-203ENST00000506820 CAPN15O75808 1086 aa12.55□□□□□ -0.4
AFP-203ENST00000506820 MYCNP04198 464 aaPredicted RBP12.54□□□□□ -0.4
AFP-203ENST00000506820 FOXD4L1Q9NU39 408 aa12.54□□□□□ -0.4
AFP-203ENST00000506820 POTEHQ6S545 545 aa12.45□□□□□ -0.42
AFP-203ENST00000506820 SPINK5Q9NQ38 1064 aaPredicted RBP12.45□□□□□ -0.42
AFP-203ENST00000506820 ZNF219Q9P2Y4 722 aaPredicted RBP12.43□□□□□ -0.42
AFP-203ENST00000506820 TRHP20396 242 aaPredicted RBP12.4□□□□□ -0.42
AFP-203ENST00000506820 DSG3P32926 999 aa12.31□□□□□ -0.44
AFP-203ENST00000506820 ZBTB22O15209 634 aa12.27□□□□□ -0.45
AFP-203ENST00000506820 ABCB7O75027 752 aa12.2□□□□□ -0.46
AFP-203ENST00000506820 ATXN8OSP0DMR3 200 aa12.18□□□□□ -0.46
AFP-203ENST00000506820 POLA2Q14181 598 aa12.11□□□□□ -0.47
AFP-203ENST00000506820 EHMT2Q96KQ7 1210 aa12.1□□□□□ -0.47
AFP-203ENST00000506820 ATF5Q9Y2D1 282 aaPredicted RBP12.07□□□□□ -0.48
AFP-203ENST00000506820 CSRNP3Q8WYN3 585 aa12.04□□□□□ -0.48
AFP-203ENST00000506820 ZBTB12Q9Y330 459 aaPredicted RBP12□□□□□ -0.49
AFP-203ENST00000506820 RBM42Q9BTD8 480 aaKnown RBP11.89□□□□□ -0.51
AFP-203ENST00000506820 FBLN2P98095 1184 aa11.81□□□□□ -0.52
AFP-203ENST00000506820 OSCARQ8IYS5 282 aa11.66□□□□□ -0.54
AFP-203ENST00000506820 AKT1S1Q96B36 256 aa11.62□□□□□ -0.55
AFP-203ENST00000506820 SPDYE2BA6NHP3 402 aa11.57□□□□□ -0.56
AFP-203ENST00000506820 SPDYE6P0CI01 402 aa11.57□□□□□ -0.56
AFP-203ENST00000506820 SPDYE2Q495Y8 402 aa11.57□□□□□ -0.56
AFP-203ENST00000506820 MKRN4PQ13434 485 aaPredicted RBP11.54□□□□□ -0.56
AFP-203ENST00000506820 ZNF692Q9BU19 519 aaPredicted RBP11.5□□□□□ -0.57
AFP-203ENST00000506820 REM2Q8IYK8 340 aaPredicted RBP11.46□□□□□ -0.57
AFP-203ENST00000506820 CHRDL2Q6WN34 429 aa11.42□□□□□ -0.58
AFP-203ENST00000506820 SSUH2Q9Y2M2 353 aa11.36□□□□□ -0.59
AFP-203ENST00000506820 SPDYE1Q8NFV5 336 aaPredicted RBP11.33□□□□□ -0.6
AFP-203ENST00000506820 PITPNM1O00562 1244 aa11.3□□□□□ -0.6
AFP-203ENST00000506820 PABPN1Q86U42 306 aaKnown RBP eCLIP11.3□□□□□ -0.6
AFP-203ENST00000506820 CLEC11AQ9Y240 323 aa11.29□□□□□ -0.6
AFP-203ENST00000506820 SPDYE4A6NLX3 237 aa11.28□□□□□ -0.6
AFP-203ENST00000506820 SP7Q8TDD2 431 aaPredicted RBP11.19□□□□□ -0.62
AFP-203ENST00000506820 PRR29P0C7W0 189 aa11.17□□□□□ -0.62
AFP-203ENST00000506820 PIP4P2Q8N4L2 257 aa11.17□□□□□ -0.62
AFP-203ENST00000506820 FXR2P51116 673 aaKnown RBP eCLIP11.16□□□□□ -0.62
AFP-203ENST00000506820 STAG3Q9UJ98 1225 aa11.16□□□□□ -0.62
AFP-203ENST00000506820 PRKAR2AP13861 404 aaKnown RBP11.07□□□□□ -0.64
AFP-203ENST00000506820 HAX1O00165 279 aa10.99□□□□□ -0.65
AFP-203ENST00000506820 FKBP8Q14318 412 aa10.98□□□□□ -0.65
AFP-203ENST00000506820 CHADLQ6NUI6 762 aa10.94□□□□□ -0.66
AFP-203ENST00000506820 PROM2Q8N271 834 aa10.93□□□□□ -0.66
AFP-203ENST00000506820 PLEKHG5O94827 1062 aa10.88□□□□□ -0.67
AFP-203ENST00000506820 FARP1Q9Y4F1 1045 aaPredicted RBP10.86□□□□□ -0.67
AFP-203ENST00000506820 CREBZFQ9NS37 354 aa10.83□□□□□ -0.68
AFP-203ENST00000506820 NPM1P06748 294 aaKnown RBP eCLIP10.81□□□□□ -0.68
AFP-203ENST00000506820 FBXO3Q9UK99 471 aa10.8□□□□□ -0.68
AFP-203ENST00000506820 C19orf67A6NJJ6 358 aa10.79□□□□□ -0.68
AFP-203ENST00000506820 MIER1Q8N108 512 aa10.79□□□□□ -0.68
AFP-203ENST00000506820 PAK3O75914 559 aaPredicted RBP10.74□□□□□ -0.69
AFP-203ENST00000506820 CD44P16070 742 aaKnown RBP10.74□□□□□ -0.69
AFP-203ENST00000506820 PLCD3Q8N3E9 789 aa10.74□□□□□ -0.69
AFP-203ENST00000506820 ZBTB47Q9UFB7 747 aaPredicted RBP10.72□□□□□ -0.69
AFP-203ENST00000506820 EVX2Q03828 476 aa10.69□□□□□ -0.7
AFP-203ENST00000506820 CLCN6P51797 869 aa10.67□□□□□ -0.7
AFP-203ENST00000506820 PLSCR2Q9NRY7 297 aa10.66□□□□□ -0.7
AFP-203ENST00000506820 ZRANB1Q9UGI0 708 aa10.65□□□□□ -0.7
AFP-203ENST00000506820 MNX1P50219 401 aaPredicted RBP10.63□□□□□ -0.71
AFP-203ENST00000506820 GABBR2O75899 941 aa10.57□□□□□ -0.72
AFP-203ENST00000506820 ZNF579Q8NAF0 562 aaKnown RBP10.55□□□□□ -0.72
AFP-203ENST00000506820 KLHL34Q8N239 644 aa10.54□□□□□ -0.72
AFP-203ENST00000506820 VASPP50552 380 aaPredicted RBP10.53□□□□□ -0.72
AFP-203ENST00000506820 TSPYL2Q9H2G4 693 aaPredicted RBP10.53□□□□□ -0.72
AFP-203ENST00000506820 LHX8Q68G74 356 aa10.47□□□□□ -0.73
AFP-203ENST00000506820 FAM212AQ96EL1 285 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms