Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TPRP12270 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TPRP12270 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TPRP12270 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TPRP12270 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TPRP12270 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TPRP12270 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TPRP12270 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TPRP12270 AC092053.1-201ENST00000605787 1936 ntBASIC14.38□□□□□ -0.11
TPRP12270 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TPRP12270 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TPRP12270 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TPRP12270 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TPRP12270 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TPRP12270 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TPRP12270 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TPRP12270 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TPRP12270 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC14.38□□□□□ -0.11
TPRP12270 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC14.38□□□□□ -0.11
TPRP12270 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC14.38□□□□□ -0.11
TPRP12270 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.38□□□□□ -0.11
TPRP12270 NAMA-206ENST00000605377 509 ntTSL 5 BASIC14.38□□□□□ -0.11
TPRP12270 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TPRP12270 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TPRP12270 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TPRP12270 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TPRP12270 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TPRP12270 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
TPRP12270 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
TPRP12270 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TPRP12270 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.38□□□□□ -0.11
TPRP12270 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TPRP12270 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
TPRP12270 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
TPRP12270 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TPRP12270 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.37□□□□□ -0.11
TPRP12270 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TPRP12270 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC14.37□□□□□ -0.11
TPRP12270 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
TPRP12270 AL354751.1-201ENST00000412768 1863 ntBASIC14.37□□□□□ -0.11
TPRP12270 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC14.37□□□□□ -0.11
TPRP12270 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TPRP12270 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TPRP12270 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TPRP12270 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TPRP12270 Z69890.1-201ENST00000382990 339 ntBASIC14.37□□□□□ -0.11
TPRP12270 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TPRP12270 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.37□□□□□ -0.11
TPRP12270 FAM58BP-201ENST00000439056 645 ntBASIC14.37□□□□□ -0.11
TPRP12270 AC245100.5-201ENST00000452108 331 ntBASIC14.37□□□□□ -0.11
TPRP12270 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.37□□□□□ -0.11
TPRP12270 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC14.37□□□□□ -0.11
TPRP12270 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TPRP12270 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC14.37□□□□□ -0.11
TPRP12270 EMC4-208ENST00000559078 599 ntTSL 3 BASIC14.37□□□□□ -0.11
TPRP12270 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TPRP12270 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.37□□□□□ -0.11
TPRP12270 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TPRP12270 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TPRP12270 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TPRP12270 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TPRP12270 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
TPRP12270 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TPRP12270 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TPRP12270 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
TPRP12270 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC14.37□□□□□ -0.11
TPRP12270 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TPRP12270 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TPRP12270 BNIP3P1-202ENST00000550043 1585 ntBASIC14.37□□□□□ -0.11
TPRP12270 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.37□□□□□ -0.11
TPRP12270 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TPRP12270 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TPRP12270 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TPRP12270 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TPRP12270 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TPRP12270 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TPRP12270 CFL1P6-201ENST00000400899 494 ntBASIC14.37□□□□□ -0.11
TPRP12270 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC14.37□□□□□ -0.11
TPRP12270 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC14.37□□□□□ -0.11
TPRP12270 STAU2-212ENST00000521419 972 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TPRP12270 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TPRP12270 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC14.37□□□□□ -0.11
TPRP12270 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC14.37□□□□□ -0.11
TPRP12270 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TPRP12270 AC008805.1-201ENST00000590892 364 ntBASIC14.37□□□□□ -0.11
TPRP12270 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC14.37□□□□□ -0.11
TPRP12270 AC011471.3-201ENST00000623576 402 ntBASIC14.37□□□□□ -0.11
TPRP12270 AC015909.3-201ENST00000572855 1794 ntBASIC14.36□□□□□ -0.11
TPRP12270 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TPRP12270 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TPRP12270 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TPRP12270 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC14.36□□□□□ -0.11
TPRP12270 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TPRP12270 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TPRP12270 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TPRP12270 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TPRP12270 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TPRP12270 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TPRP12270 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
TPRP12270 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms