Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.98□□□□□ -0.17
FREM3P0C091 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
FREM3P0C091 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC13.98□□□□□ -0.17
FREM3P0C091 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
FREM3P0C091 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC13.98□□□□□ -0.17
FREM3P0C091 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
FREM3P0C091 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.98□□□□□ -0.17
FREM3P0C091 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
FREM3P0C091 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
FREM3P0C091 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
FREM3P0C091 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
FREM3P0C091 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
FREM3P0C091 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
FREM3P0C091 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
FREM3P0C091 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
FREM3P0C091 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
FREM3P0C091 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
FREM3P0C091 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
FREM3P0C091 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
FREM3P0C091 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
FREM3P0C091 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.98□□□□□ -0.17
FREM3P0C091 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
FREM3P0C091 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.98□□□□□ -0.17
FREM3P0C091 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.98□□□□□ -0.17
FREM3P0C091 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.98□□□□□ -0.17
FREM3P0C091 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
FREM3P0C091 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
FREM3P0C091 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.98□□□□□ -0.17
FREM3P0C091 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
FREM3P0C091 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.97□□□□□ -0.17
FREM3P0C091 AC104457.1-201ENST00000401024 814 ntBASIC13.97□□□□□ -0.17
FREM3P0C091 MIR1202-201ENST00000408529 83 ntBASIC13.97□□□□□ -0.17
FREM3P0C091 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.97□□□□□ -0.17
FREM3P0C091 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.97□□□□□ -0.17
FREM3P0C091 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.97□□□□□ -0.17
FREM3P0C091 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
FREM3P0C091 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.97□□□□□ -0.17
FREM3P0C091 SAMD11P1-201ENST00000571429 661 ntBASIC13.97□□□□□ -0.17
FREM3P0C091 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.97□□□□□ -0.17
FREM3P0C091 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
FREM3P0C091 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
FREM3P0C091 AC023157.3-201ENST00000619086 2088 ntBASIC13.97□□□□□ -0.17
FREM3P0C091 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
FREM3P0C091 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
FREM3P0C091 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
FREM3P0C091 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
FREM3P0C091 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
FREM3P0C091 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
FREM3P0C091 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
FREM3P0C091 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
FREM3P0C091 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
FREM3P0C091 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
FREM3P0C091 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
FREM3P0C091 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
FREM3P0C091 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.97□□□□□ -0.17
FREM3P0C091 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
FREM3P0C091 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
FREM3P0C091 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
FREM3P0C091 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
FREM3P0C091 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
FREM3P0C091 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.97□□□□□ -0.17
FREM3P0C091 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.97□□□□□ -0.17
FREM3P0C091 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
FREM3P0C091 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.97□□□□□ -0.17
FREM3P0C091 AC025279.2-201ENST00000569730 653 ntBASIC13.97□□□□□ -0.17
FREM3P0C091 AC233724.13-201ENST00000598383 410 ntBASIC13.97□□□□□ -0.17
FREM3P0C091 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.97□□□□□ -0.17
FREM3P0C091 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
FREM3P0C091 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
FREM3P0C091 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
FREM3P0C091 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
FREM3P0C091 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
FREM3P0C091 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
FREM3P0C091 MST1L-201ENST00000442552 2185 ntBASIC13.97□□□□□ -0.17
FREM3P0C091 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
FREM3P0C091 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
FREM3P0C091 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.97□□□□□ -0.17
FREM3P0C091 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
FREM3P0C091 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
FREM3P0C091 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.96□□□□□ -0.17
FREM3P0C091 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.96□□□□□ -0.17
FREM3P0C091 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC13.96□□□□□ -0.17
FREM3P0C091 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.96□□□□□ -0.17
FREM3P0C091 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
FREM3P0C091 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
FREM3P0C091 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
FREM3P0C091 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
FREM3P0C091 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
FREM3P0C091 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
FREM3P0C091 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
FREM3P0C091 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
FREM3P0C091 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
FREM3P0C091 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC13.96□□□□□ -0.17
FREM3P0C091 C1QBPP1-201ENST00000400117 770 ntBASIC13.96□□□□□ -0.17
FREM3P0C091 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
FREM3P0C091 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.96□□□□□ -0.17
FREM3P0C091 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.96□□□□□ -0.17
FREM3P0C091 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
FREM3P0C091 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.96□□□□□ -0.17
FREM3P0C091 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms