Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.13□□□□□ -0.31
CD3DP04234 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.13□□□□□ -0.31
CD3DP04234 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.13□□□□□ -0.31
CD3DP04234 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.13□□□□□ -0.31
CD3DP04234 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.13□□□□□ -0.31
CD3DP04234 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.13□□□□□ -0.31
CD3DP04234 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD3DP04234 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CD3DP04234 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD3DP04234 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CD3DP04234 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD3DP04234 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD3DP04234 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD3DP04234 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CD3DP04234 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD3DP04234 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD3DP04234 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CD3DP04234 GHSR-202ENST00000427970 912 ntBASIC13.13□□□□□ -0.31
CD3DP04234 RHOQP3-201ENST00000437982 621 ntBASIC13.13□□□□□ -0.31
CD3DP04234 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.13□□□□□ -0.31
CD3DP04234 TCAP-202ENST00000578283 583 ntTSL 5 BASIC13.13□□□□□ -0.31
CD3DP04234 AC023141.13-201ENST00000604991 943 ntBASIC13.13□□□□□ -0.31
CD3DP04234 AL161645.1-201ENST00000622716 1255 ntBASIC13.13□□□□□ -0.31
CD3DP04234 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CD3DP04234 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD3DP04234 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD3DP04234 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD3DP04234 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD3DP04234 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CD3DP04234 AC089987.1-201ENST00000551654 2209 ntBASIC13.13□□□□□ -0.31
CD3DP04234 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CD3DP04234 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CD3DP04234 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CD3DP04234 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.13□□□□□ -0.31
CD3DP04234 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD3DP04234 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD3DP04234 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD3DP04234 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.13□□□□□ -0.31
CD3DP04234 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD3DP04234 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CD3DP04234 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD3DP04234 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.13□□□□□ -0.31
CD3DP04234 AC015802.1-201ENST00000588104 1449 ntBASIC13.13□□□□□ -0.31
CD3DP04234 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD3DP04234 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.13□□□□□ -0.31
CD3DP04234 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CD3DP04234 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD3DP04234 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
CD3DP04234 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CD3DP04234 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CD3DP04234 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.12□□□□□ -0.31
CD3DP04234 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD3DP04234 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CD3DP04234 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD3DP04234 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CD3DP04234 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.12□□□□□ -0.31
CD3DP04234 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC13.12□□□□□ -0.31
CD3DP04234 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CD3DP04234 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD3DP04234 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD3DP04234 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD3DP04234 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CD3DP04234 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CD3DP04234 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD3DP04234 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD3DP04234 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CD3DP04234 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.12□□□□□ -0.31
CD3DP04234 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
CD3DP04234 RPS2P28-201ENST00000314255 741 ntBASIC13.12□□□□□ -0.31
CD3DP04234 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CD3DP04234 CRYGEP-201ENST00000412192 528 ntBASIC13.12□□□□□ -0.31
CD3DP04234 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC13.12□□□□□ -0.31
CD3DP04234 HCG4B-203ENST00000450128 991 ntBASIC13.12□□□□□ -0.31
CD3DP04234 AC018712.1-201ENST00000455767 687 ntBASIC13.12□□□□□ -0.31
CD3DP04234 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC13.12□□□□□ -0.31
CD3DP04234 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.12□□□□□ -0.31
CD3DP04234 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CD3DP04234 AC007064.4-201ENST00000637740 555 ntBASIC13.12□□□□□ -0.31
CD3DP04234 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD3DP04234 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD3DP04234 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CD3DP04234 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD3DP04234 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CD3DP04234 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
CD3DP04234 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.12□□□□□ -0.31
CD3DP04234 AC011474.4-201ENST00000623523 2076 ntBASIC13.12□□□□□ -0.31
CD3DP04234 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD3DP04234 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CD3DP04234 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD3DP04234 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CD3DP04234 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CD3DP04234 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.12□□□□□ -0.31
CD3DP04234 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.12□□□□□ -0.31
CD3DP04234 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CD3DP04234 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD3DP04234 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD3DP04234 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CD3DP04234 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.12□□□□□ -0.31
CD3DP04234 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD3DP04234 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms