Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC9.3□□□□□ -0.92
APOBP04114 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC9.3□□□□□ -0.92
APOBP04114 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
APOBP04114 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
APOBP04114 AC084752.1-201ENST00000509766 622 ntBASIC9.3□□□□□ -0.92
APOBP04114 HLA-DQB1-202ENST00000399079 1501 ntBASIC9.3□□□□□ -0.92
APOBP04114 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC9.3□□□□□ -0.92
APOBP04114 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
APOBP04114 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
APOBP04114 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
APOBP04114 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
APOBP04114 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC9.3□□□□□ -0.92
APOBP04114 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC9.29□□□□□ -0.92
APOBP04114 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC9.29□□□□□ -0.92
APOBP04114 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
APOBP04114 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC9.29□□□□□ -0.92
APOBP04114 TREHP1-201ENST00000531328 465 ntBASIC9.29□□□□□ -0.92
APOBP04114 AC131206.1-201ENST00000538078 1211 ntBASIC9.29□□□□□ -0.92
APOBP04114 MIR3188-201ENST00000583494 85 ntBASIC9.29□□□□□ -0.92
APOBP04114 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC9.29□□□□□ -0.92
APOBP04114 AC140113.1-201ENST00000603467 169 ntBASIC9.29□□□□□ -0.92
APOBP04114 LINC01783-202ENST00000614408 828 ntBASIC9.29□□□□□ -0.92
APOBP04114 BX284668.2-205ENST00000619677 828 ntBASIC9.29□□□□□ -0.92
APOBP04114 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
APOBP04114 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
APOBP04114 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC9.29□□□□□ -0.92
APOBP04114 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
APOBP04114 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
APOBP04114 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
APOBP04114 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
APOBP04114 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
APOBP04114 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
APOBP04114 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
APOBP04114 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
APOBP04114 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
APOBP04114 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC9.29□□□□□ -0.92
APOBP04114 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC9.29□□□□□ -0.92
APOBP04114 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
APOBP04114 RN7SL470P-201ENST00000583069 259 ntBASIC9.29□□□□□ -0.92
APOBP04114 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC9.29□□□□□ -0.92
APOBP04114 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
APOBP04114 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
APOBP04114 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
APOBP04114 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC9.29□□□□□ -0.92
APOBP04114 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC9.29□□□□□ -0.92
APOBP04114 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
APOBP04114 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
APOBP04114 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
APOBP04114 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
APOBP04114 KRT18P9-201ENST00000604826 1300 ntBASIC9.29□□□□□ -0.92
APOBP04114 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC9.29□□□□□ -0.92
APOBP04114 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
APOBP04114 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
APOBP04114 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC9.29□□□□□ -0.92
APOBP04114 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC9.29□□□□□ -0.92
APOBP04114 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
APOBP04114 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
APOBP04114 RNA5SP359-201ENST00000364838 113 ntBASIC9.29□□□□□ -0.92
APOBP04114 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC9.29□□□□□ -0.92
APOBP04114 ORAOV1P1-201ENST00000503108 395 ntBASIC9.29□□□□□ -0.92
APOBP04114 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC9.29□□□□□ -0.92
APOBP04114 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC9.29□□□□□ -0.92
APOBP04114 DBP-202ENST00000593500 712 ntTSL 2 BASIC9.29□□□□□ -0.92
APOBP04114 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
APOBP04114 AC011471.3-201ENST00000623576 402 ntBASIC9.29□□□□□ -0.92
APOBP04114 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
APOBP04114 AL590440.2-201ENST00000641973 1595 ntBASIC9.29□□□□□ -0.92
APOBP04114 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
APOBP04114 API5-208ENST00000531273 1868 ntTSL 2 BASIC9.29□□□□□ -0.92
APOBP04114 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
APOBP04114 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
APOBP04114 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
APOBP04114 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
APOBP04114 SUPT20HL2-201ENST00000486479 2409 ntBASIC9.29□□□□□ -0.92
APOBP04114 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
APOBP04114 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
APOBP04114 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC9.29□□□□□ -0.92
APOBP04114 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
APOBP04114 SERF2-209ENST00000409646 559 ntTSL 4 BASIC9.29□□□□□ -0.92
APOBP04114 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC9.29□□□□□ -0.92
APOBP04114 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC9.29□□□□□ -0.92
APOBP04114 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC9.29□□□□□ -0.92
APOBP04114 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC9.29□□□□□ -0.92
APOBP04114 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
APOBP04114 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC9.29□□□□□ -0.92
APOBP04114 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
APOBP04114 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC9.29□□□□□ -0.92
APOBP04114 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
APOBP04114 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC9.28□□□□□ -0.92
APOBP04114 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
APOBP04114 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
APOBP04114 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
APOBP04114 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
APOBP04114 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC9.28□□□□□ -0.92
APOBP04114 OR10N1P-201ENST00000392758 869 ntBASIC9.28□□□□□ -0.92
APOBP04114 HLA-DMA-203ENST00000395305 777 ntBASIC9.28□□□□□ -0.92
APOBP04114 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
APOBP04114 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC9.28□□□□□ -0.92
APOBP04114 SERBP1P2-201ENST00000436888 1164 ntBASIC9.28□□□□□ -0.92
APOBP04114 OR2R1P-201ENST00000441404 914 ntBASIC9.28□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms