Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC13.49□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 SLC5A11-202ENST00000424767 2399 ntTSL 2 BASIC13.49□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 Telomerase-vert.1-201ENST00000363312 438 ntBASIC13.49□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 ECEL1P3-201ENST00000427961 737 ntBASIC13.49□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC13.49□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 SEC1P-202ENST00000473944 940 ntBASIC13.49□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 AC110048.1-201ENST00000604293 2157 ntBASIC13.49□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 FAM214B-204ENST00000378566 2566 ntTSL 2 BASIC13.49□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 AC009336.1-201ENST00000608941 1553 ntBASIC13.49□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 TBC1D3P5-201ENST00000579401 1545 ntBASIC13.49□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.49□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC13.48□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 FUBP1-202ENST00000370767 2524 ntTSL 5 BASIC13.48□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC13.48□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC13.48□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC13.48□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.48□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC13.48□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC13.48□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 AP002414.1-201ENST00000391405 1147 ntBASIC13.48□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 AC087499.1-201ENST00000418141 1075 ntBASIC13.48□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC13.48□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC13.48□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.48□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC13.48□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC13.48□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 AC111152.3-201ENST00000569699 673 ntBASIC13.48□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC13.48□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 AC145285.6-201ENST00000604632 637 ntBASIC13.48□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC13.48□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC13.48□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 SLC3A1-205ENST00000409387 2334 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 AL049757.1-201ENST00000616842 1596 ntBASIC13.48□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 IFFO1-206ENST00000465801 2850 ntTSL 5 BASIC13.48□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 DLL1-201ENST00000366756 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 CICP7-201ENST00000432723 2477 ntBASIC13.48□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC13.48□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 AC018442.1-201ENST00000421439 2061 ntBASIC13.48□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC13.47□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 PTPRN-202ENST00000409251 3622 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC13.47□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 PNPO-217ENST00000642017 3465 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms