Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
PCDHGA11Q9Y5H2 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
PCDHGA11Q9Y5H2 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.04■□□□□ -0
PCDHGA11Q9Y5H2 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.04■□□□□ -0
PCDHGA11Q9Y5H2 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.04■□□□□ -0
PCDHGA11Q9Y5H2 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.04■□□□□ -0
PCDHGA11Q9Y5H2 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDHGA11Q9Y5H2 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
PCDHGA11Q9Y5H2 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.03■□□□□ -0
PCDHGA11Q9Y5H2 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.03■□□□□ -0
PCDHGA11Q9Y5H2 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCDHGA11Q9Y5H2 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCDHGA11Q9Y5H2 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.03■□□□□ -0
PCDHGA11Q9Y5H2 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
PCDHGA11Q9Y5H2 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.03■□□□□ -0
PCDHGA11Q9Y5H2 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
PCDHGA11Q9Y5H2 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.03■□□□□ -0
PCDHGA11Q9Y5H2 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.03■□□□□ -0
PCDHGA11Q9Y5H2 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
PCDHGA11Q9Y5H2 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCDHGA11Q9Y5H2 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
PCDHGA11Q9Y5H2 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCDHGA11Q9Y5H2 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PCDHGA11Q9Y5H2 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCDHGA11Q9Y5H2 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
PCDHGA11Q9Y5H2 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
PCDHGA11Q9Y5H2 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.03■□□□□ -0
PCDHGA11Q9Y5H2 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.03■□□□□ -0
PCDHGA11Q9Y5H2 TOMM22P5-201ENST00000416399 439 ntBASIC15.03■□□□□ -0
PCDHGA11Q9Y5H2 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.03■□□□□ -0
PCDHGA11Q9Y5H2 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.03■□□□□ -0
PCDHGA11Q9Y5H2 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.03■□□□□ -0
PCDHGA11Q9Y5H2 METTL21AP1-201ENST00000438852 635 ntBASIC15.03■□□□□ -0
PCDHGA11Q9Y5H2 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCDHGA11Q9Y5H2 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.03■□□□□ -0
PCDHGA11Q9Y5H2 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PCDHGA11Q9Y5H2 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.03■□□□□ -0
PCDHGA11Q9Y5H2 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.03■□□□□ -0
PCDHGA11Q9Y5H2 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.03■□□□□ -0
PCDHGA11Q9Y5H2 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.03■□□□□ -0
PCDHGA11Q9Y5H2 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.03■□□□□ -0
PCDHGA11Q9Y5H2 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
PCDHGA11Q9Y5H2 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.03■□□□□ -0
PCDHGA11Q9Y5H2 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.03■□□□□ -0
PCDHGA11Q9Y5H2 AL109936.8-201ENST00000641772 604 ntBASIC15.03■□□□□ -0
PCDHGA11Q9Y5H2 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCDHGA11Q9Y5H2 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
PCDHGA11Q9Y5H2 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
PCDHGA11Q9Y5H2 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
PCDHGA11Q9Y5H2 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCDHGA11Q9Y5H2 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PCDHGA11Q9Y5H2 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCDHGA11Q9Y5H2 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
PCDHGA11Q9Y5H2 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCDHGA11Q9Y5H2 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.03■□□□□ -0
PCDHGA11Q9Y5H2 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.03■□□□□ -0
PCDHGA11Q9Y5H2 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
PCDHGA11Q9Y5H2 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.03■□□□□ -0
PCDHGA11Q9Y5H2 AL137784.3-201ENST00000623858 2288 ntBASIC15.03■□□□□ -0
PCDHGA11Q9Y5H2 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCDHGA11Q9Y5H2 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.02■□□□□ -0
PCDHGA11Q9Y5H2 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.02■□□□□ -0
PCDHGA11Q9Y5H2 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.02■□□□□ -0
PCDHGA11Q9Y5H2 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.02■□□□□ -0
PCDHGA11Q9Y5H2 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.02■□□□□ -0
PCDHGA11Q9Y5H2 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.02■□□□□ -0
PCDHGA11Q9Y5H2 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
PCDHGA11Q9Y5H2 LINC00552-201ENST00000625151 2579 ntBASIC15.02■□□□□ -0
PCDHGA11Q9Y5H2 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
PCDHGA11Q9Y5H2 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.02■□□□□ -0
PCDHGA11Q9Y5H2 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.02■□□□□ -0
PCDHGA11Q9Y5H2 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
PCDHGA11Q9Y5H2 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PCDHGA11Q9Y5H2 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PCDHGA11Q9Y5H2 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
PCDHGA11Q9Y5H2 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PCDHGA11Q9Y5H2 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PCDHGA11Q9Y5H2 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
PCDHGA11Q9Y5H2 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.02■□□□□ -0
PCDHGA11Q9Y5H2 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.02■□□□□ -0
PCDHGA11Q9Y5H2 TREML5P-201ENST00000421694 576 ntBASIC15.02■□□□□ -0
PCDHGA11Q9Y5H2 AC092580.3-201ENST00000430932 139 ntBASIC15.02■□□□□ -0
PCDHGA11Q9Y5H2 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.02■□□□□ -0
PCDHGA11Q9Y5H2 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.02■□□□□ -0
PCDHGA11Q9Y5H2 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.02■□□□□ -0
PCDHGA11Q9Y5H2 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.02■□□□□ -0
PCDHGA11Q9Y5H2 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.02■□□□□ -0
PCDHGA11Q9Y5H2 AF228730.6-201ENST00000641497 218 ntBASIC15.02■□□□□ -0
PCDHGA11Q9Y5H2 AC084121.3-201ENST00000641716 218 ntBASIC15.02■□□□□ -0
PCDHGA11Q9Y5H2 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PCDHGA11Q9Y5H2 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PCDHGA11Q9Y5H2 AC013726.1-201ENST00000563747 2285 ntBASIC15.02□□□□□ -0.01
PCDHGA11Q9Y5H2 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.02□□□□□ -0.01
PCDHGA11Q9Y5H2 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.02□□□□□ -0.01
PCDHGA11Q9Y5H2 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
PCDHGA11Q9Y5H2 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PCDHGA11Q9Y5H2 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PCDHGA11Q9Y5H2 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
PCDHGA11Q9Y5H2 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PCDHGA11Q9Y5H2 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms