Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
NPIPA1Q9UND3 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
NPIPA1Q9UND3 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA1Q9UND3 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA1Q9UND3 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA1Q9UND3 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA1Q9UND3 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA1Q9UND3 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.28□□□□□ -0.12
NPIPA1Q9UND3 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA1Q9UND3 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA1Q9UND3 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA1Q9UND3 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA1Q9UND3 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.28□□□□□ -0.12
NPIPA1Q9UND3 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA1Q9UND3 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA1Q9UND3 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA1Q9UND3 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA1Q9UND3 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA1Q9UND3 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA1Q9UND3 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA1Q9UND3 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.28□□□□□ -0.12
NPIPA1Q9UND3 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA1Q9UND3 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA1Q9UND3 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA1Q9UND3 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA1Q9UND3 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.28□□□□□ -0.12
NPIPA1Q9UND3 BOLA2P3-201ENST00000404566 256 ntBASIC14.28□□□□□ -0.12
NPIPA1Q9UND3 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.28□□□□□ -0.12
NPIPA1Q9UND3 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
NPIPA1Q9UND3 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA1Q9UND3 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA1Q9UND3 KRT223P-202ENST00000449164 1292 ntBASIC14.28□□□□□ -0.12
NPIPA1Q9UND3 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA1Q9UND3 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.28□□□□□ -0.12
NPIPA1Q9UND3 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.28□□□□□ -0.12
NPIPA1Q9UND3 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.28□□□□□ -0.12
NPIPA1Q9UND3 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA1Q9UND3 SLED1-202ENST00000512051 380 ntBASIC14.28□□□□□ -0.12
NPIPA1Q9UND3 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.28□□□□□ -0.12
NPIPA1Q9UND3 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA1Q9UND3 SLC25A47P1-201ENST00000531577 414 ntBASIC14.28□□□□□ -0.12
NPIPA1Q9UND3 TDH-203ENST00000531764 1110 ntBASIC14.28□□□□□ -0.12
NPIPA1Q9UND3 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA1Q9UND3 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.28□□□□□ -0.12
NPIPA1Q9UND3 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.28□□□□□ -0.12
NPIPA1Q9UND3 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
NPIPA1Q9UND3 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
NPIPA1Q9UND3 AC018665.1-201ENST00000622927 1362 ntBASIC14.28□□□□□ -0.12
NPIPA1Q9UND3 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
NPIPA1Q9UND3 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.28□□□□□ -0.12
NPIPA1Q9UND3 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.28□□□□□ -0.12
NPIPA1Q9UND3 COX11-210ENST00000639671 696 ntBASIC14.28□□□□□ -0.12
NPIPA1Q9UND3 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.28□□□□□ -0.12
NPIPA1Q9UND3 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
NPIPA1Q9UND3 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA1Q9UND3 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA1Q9UND3 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
NPIPA1Q9UND3 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPA1Q9UND3 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.12
NPIPA1Q9UND3 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPA1Q9UND3 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.12
NPIPA1Q9UND3 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.27□□□□□ -0.12
NPIPA1Q9UND3 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPA1Q9UND3 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.27□□□□□ -0.12
NPIPA1Q9UND3 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.27□□□□□ -0.12
NPIPA1Q9UND3 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.27□□□□□ -0.12
NPIPA1Q9UND3 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPA1Q9UND3 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPA1Q9UND3 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPA1Q9UND3 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPA1Q9UND3 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPA1Q9UND3 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPA1Q9UND3 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
NPIPA1Q9UND3 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.27□□□□□ -0.13
NPIPA1Q9UND3 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPA1Q9UND3 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.27□□□□□ -0.13
NPIPA1Q9UND3 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPA1Q9UND3 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.27□□□□□ -0.13
NPIPA1Q9UND3 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.27□□□□□ -0.13
NPIPA1Q9UND3 AC134915.1-201ENST00000426461 574 ntBASIC14.27□□□□□ -0.13
NPIPA1Q9UND3 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.13
NPIPA1Q9UND3 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPA1Q9UND3 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPA1Q9UND3 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPA1Q9UND3 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC14.27□□□□□ -0.13
NPIPA1Q9UND3 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.27□□□□□ -0.13
NPIPA1Q9UND3 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.27□□□□□ -0.13
NPIPA1Q9UND3 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.27□□□□□ -0.13
NPIPA1Q9UND3 AC104989.1-201ENST00000519711 778 ntBASIC14.27□□□□□ -0.13
NPIPA1Q9UND3 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.27□□□□□ -0.13
NPIPA1Q9UND3 SNX29P1-201ENST00000548357 1007 ntBASIC14.27□□□□□ -0.13
NPIPA1Q9UND3 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.27□□□□□ -0.13
NPIPA1Q9UND3 AC233724.13-201ENST00000598383 410 ntBASIC14.27□□□□□ -0.13
NPIPA1Q9UND3 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.27□□□□□ -0.13
NPIPA1Q9UND3 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPA1Q9UND3 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.27□□□□□ -0.13
NPIPA1Q9UND3 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.27□□□□□ -0.13
NPIPA1Q9UND3 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPA1Q9UND3 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.27□□□□□ -0.13
NPIPA1Q9UND3 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms