Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
PDLIM5Q96HC4 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.06■□□□□ 0
PDLIM5Q96HC4 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PDLIM5Q96HC4 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.06■□□□□ 0
PDLIM5Q96HC4 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.06■□□□□ 0
PDLIM5Q96HC4 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
PDLIM5Q96HC4 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
PDLIM5Q96HC4 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.06■□□□□ 0
PDLIM5Q96HC4 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
PDLIM5Q96HC4 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.05■□□□□ 0
PDLIM5Q96HC4 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.05■□□□□ 0
PDLIM5Q96HC4 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
PDLIM5Q96HC4 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PDLIM5Q96HC4 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.05■□□□□ 0
PDLIM5Q96HC4 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PDLIM5Q96HC4 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PDLIM5Q96HC4 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.05■□□□□ 0
PDLIM5Q96HC4 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PDLIM5Q96HC4 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
PDLIM5Q96HC4 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PDLIM5Q96HC4 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PDLIM5Q96HC4 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.05■□□□□ -0
PDLIM5Q96HC4 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
PDLIM5Q96HC4 AL353779.1-201ENST00000434793 351 ntBASIC15.05■□□□□ -0
PDLIM5Q96HC4 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.05■□□□□ -0
PDLIM5Q96HC4 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.05■□□□□ -0
PDLIM5Q96HC4 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.05■□□□□ -0
PDLIM5Q96HC4 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.05■□□□□ -0
PDLIM5Q96HC4 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.05■□□□□ -0
PDLIM5Q96HC4 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.05■□□□□ -0
PDLIM5Q96HC4 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
PDLIM5Q96HC4 AC093813.1-201ENST00000605066 256 ntBASIC15.05■□□□□ -0
PDLIM5Q96HC4 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
PDLIM5Q96HC4 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
PDLIM5Q96HC4 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PDLIM5Q96HC4 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PDLIM5Q96HC4 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PDLIM5Q96HC4 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PDLIM5Q96HC4 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PDLIM5Q96HC4 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PDLIM5Q96HC4 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.05■□□□□ -0
PDLIM5Q96HC4 AC007292.2-201ENST00000593524 1812 ntBASIC15.05■□□□□ -0
PDLIM5Q96HC4 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.05■□□□□ -0
PDLIM5Q96HC4 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.05■□□□□ -0
PDLIM5Q96HC4 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.05■□□□□ -0
PDLIM5Q96HC4 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PDLIM5Q96HC4 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.05■□□□□ -0
PDLIM5Q96HC4 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PDLIM5Q96HC4 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
PDLIM5Q96HC4 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.05■□□□□ -0
PDLIM5Q96HC4 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PDLIM5Q96HC4 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ -0
PDLIM5Q96HC4 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDLIM5Q96HC4 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.04■□□□□ -0
PDLIM5Q96HC4 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
PDLIM5Q96HC4 AL009178.2-201ENST00000597278 2719 ntBASIC15.04■□□□□ -0
PDLIM5Q96HC4 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.04■□□□□ -0
PDLIM5Q96HC4 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDLIM5Q96HC4 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.04■□□□□ -0
PDLIM5Q96HC4 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
PDLIM5Q96HC4 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
PDLIM5Q96HC4 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDLIM5Q96HC4 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.04■□□□□ -0
PDLIM5Q96HC4 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDLIM5Q96HC4 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.04■□□□□ -0
PDLIM5Q96HC4 AL138799.1-201ENST00000448213 1675 ntBASIC15.04■□□□□ -0
PDLIM5Q96HC4 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.04■□□□□ -0
PDLIM5Q96HC4 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
PDLIM5Q96HC4 LILRP1-201ENST00000444199 1370 ntBASIC15.04■□□□□ -0
PDLIM5Q96HC4 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.04■□□□□ -0
PDLIM5Q96HC4 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.04■□□□□ -0
PDLIM5Q96HC4 SPDYE19P-201ENST00000338590 713 ntBASIC15.04■□□□□ -0
PDLIM5Q96HC4 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.04■□□□□ -0
PDLIM5Q96HC4 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
PDLIM5Q96HC4 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.04■□□□□ -0
PDLIM5Q96HC4 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.04■□□□□ -0
PDLIM5Q96HC4 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
PDLIM5Q96HC4 RPL13AP25-201ENST00000484130 612 ntBASIC15.04■□□□□ -0
PDLIM5Q96HC4 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.04■□□□□ -0
PDLIM5Q96HC4 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
PDLIM5Q96HC4 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
PDLIM5Q96HC4 BRI3BPP1-201ENST00000594224 787 ntBASIC15.04■□□□□ -0
PDLIM5Q96HC4 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.04■□□□□ -0
PDLIM5Q96HC4 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
PDLIM5Q96HC4 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.04■□□□□ -0
PDLIM5Q96HC4 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDLIM5Q96HC4 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
PDLIM5Q96HC4 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDLIM5Q96HC4 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDLIM5Q96HC4 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDLIM5Q96HC4 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.04■□□□□ -0
PDLIM5Q96HC4 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDLIM5Q96HC4 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDLIM5Q96HC4 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDLIM5Q96HC4 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDLIM5Q96HC4 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.04■□□□□ -0
PDLIM5Q96HC4 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.04■□□□□ -0
PDLIM5Q96HC4 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
PDLIM5Q96HC4 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
PDLIM5Q96HC4 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms