Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TM9SF4Q92544 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.64□□□□□ -0.07
TM9SF4Q92544 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TM9SF4Q92544 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.64□□□□□ -0.07
TM9SF4Q92544 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.64□□□□□ -0.07
TM9SF4Q92544 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TM9SF4Q92544 AC010319.3-201ENST00000597028 470 ntBASIC14.64□□□□□ -0.07
TM9SF4Q92544 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.64□□□□□ -0.07
TM9SF4Q92544 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.64□□□□□ -0.07
TM9SF4Q92544 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.64□□□□□ -0.07
TM9SF4Q92544 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TM9SF4Q92544 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TM9SF4Q92544 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.64□□□□□ -0.07
TM9SF4Q92544 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
TM9SF4Q92544 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TM9SF4Q92544 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.64□□□□□ -0.07
TM9SF4Q92544 KRT8P37-201ENST00000451609 1420 ntBASIC14.64□□□□□ -0.07
TM9SF4Q92544 AL691432.1-201ENST00000596308 1422 ntBASIC14.64□□□□□ -0.07
TM9SF4Q92544 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.64□□□□□ -0.07
TM9SF4Q92544 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TM9SF4Q92544 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.64□□□□□ -0.07
TM9SF4Q92544 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.64□□□□□ -0.07
TM9SF4Q92544 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TM9SF4Q92544 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TM9SF4Q92544 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
TM9SF4Q92544 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TM9SF4Q92544 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TM9SF4Q92544 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TM9SF4Q92544 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TM9SF4Q92544 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TM9SF4Q92544 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TM9SF4Q92544 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TM9SF4Q92544 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.63□□□□□ -0.07
TM9SF4Q92544 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TM9SF4Q92544 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.63□□□□□ -0.07
TM9SF4Q92544 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TM9SF4Q92544 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TM9SF4Q92544 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TM9SF4Q92544 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TM9SF4Q92544 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TM9SF4Q92544 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TM9SF4Q92544 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.63□□□□□ -0.07
TM9SF4Q92544 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TM9SF4Q92544 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
TM9SF4Q92544 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TM9SF4Q92544 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TM9SF4Q92544 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TM9SF4Q92544 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TM9SF4Q92544 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TM9SF4Q92544 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TM9SF4Q92544 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TM9SF4Q92544 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.63□□□□□ -0.07
TM9SF4Q92544 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TM9SF4Q92544 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.63□□□□□ -0.07
TM9SF4Q92544 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.63□□□□□ -0.07
TM9SF4Q92544 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.63□□□□□ -0.07
TM9SF4Q92544 AC104989.1-201ENST00000519711 778 ntBASIC14.63□□□□□ -0.07
TM9SF4Q92544 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.63□□□□□ -0.07
TM9SF4Q92544 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.63□□□□□ -0.07
TM9SF4Q92544 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TM9SF4Q92544 BTNL10-201ENST00000595971 695 ntBASIC14.63□□□□□ -0.07
TM9SF4Q92544 AC008735.3-201ENST00000596646 500 ntBASIC14.63□□□□□ -0.07
TM9SF4Q92544 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.63□□□□□ -0.07
TM9SF4Q92544 COX11-210ENST00000639671 696 ntBASIC14.63□□□□□ -0.07
TM9SF4Q92544 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TM9SF4Q92544 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.63□□□□□ -0.07
TM9SF4Q92544 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.63□□□□□ -0.07
TM9SF4Q92544 KRT8P22-201ENST00000562317 1415 ntBASIC14.63□□□□□ -0.07
TM9SF4Q92544 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.63□□□□□ -0.07
TM9SF4Q92544 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TM9SF4Q92544 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TM9SF4Q92544 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.63□□□□□ -0.07
TM9SF4Q92544 AL109954.1-202ENST00000564051 2148 ntBASIC14.63□□□□□ -0.07
TM9SF4Q92544 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
TM9SF4Q92544 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TM9SF4Q92544 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TM9SF4Q92544 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TM9SF4Q92544 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.63□□□□□ -0.07
TM9SF4Q92544 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.63□□□□□ -0.07
TM9SF4Q92544 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TM9SF4Q92544 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TM9SF4Q92544 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
TM9SF4Q92544 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TM9SF4Q92544 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TM9SF4Q92544 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TM9SF4Q92544 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TM9SF4Q92544 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
TM9SF4Q92544 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
TM9SF4Q92544 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
TM9SF4Q92544 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TM9SF4Q92544 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TM9SF4Q92544 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.62□□□□□ -0.07
TM9SF4Q92544 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TM9SF4Q92544 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TM9SF4Q92544 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TM9SF4Q92544 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
TM9SF4Q92544 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.62□□□□□ -0.07
TM9SF4Q92544 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
TM9SF4Q92544 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TM9SF4Q92544 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms