Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SMIM11BQ8TCY0 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC10.08□□□□□ -0.8
SMIM11BQ8TCY0 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SMIM11BQ8TCY0 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SMIM11BQ8TCY0 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
SMIM11BQ8TCY0 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
SMIM11BQ8TCY0 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SMIM11BQ8TCY0 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
SMIM11BQ8TCY0 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
SMIM11BQ8TCY0 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
SMIM11BQ8TCY0 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SMIM11BQ8TCY0 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC10.08□□□□□ -0.8
SMIM11BQ8TCY0 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SMIM11BQ8TCY0 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC10.08□□□□□ -0.8
SMIM11BQ8TCY0 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC10.08□□□□□ -0.8
SMIM11BQ8TCY0 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
SMIM11BQ8TCY0 RPL5P21-201ENST00000404620 815 ntBASIC10.08□□□□□ -0.8
SMIM11BQ8TCY0 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC10.08□□□□□ -0.8
SMIM11BQ8TCY0 NUS1P2-201ENST00000417358 873 ntBASIC10.08□□□□□ -0.8
SMIM11BQ8TCY0 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC10.08□□□□□ -0.8
SMIM11BQ8TCY0 BET1L-206ENST00000486280 665 ntTSL 3 BASIC10.08□□□□□ -0.8
SMIM11BQ8TCY0 KRT18P34-201ENST00000488218 1270 ntBASIC10.08□□□□□ -0.8
SMIM11BQ8TCY0 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC10.08□□□□□ -0.8
SMIM11BQ8TCY0 AC104819.1-201ENST00000504587 486 ntBASIC10.08□□□□□ -0.8
SMIM11BQ8TCY0 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC10.08□□□□□ -0.8
SMIM11BQ8TCY0 AC002347.1-201ENST00000569543 541 ntBASIC10.08□□□□□ -0.8
SMIM11BQ8TCY0 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SMIM11BQ8TCY0 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SMIM11BQ8TCY0 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC10.08□□□□□ -0.8
SMIM11BQ8TCY0 CCNC-219ENST00000627680 896 ntTSL 5 BASIC10.08□□□□□ -0.8
SMIM11BQ8TCY0 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SMIM11BQ8TCY0 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC10.08□□□□□ -0.8
SMIM11BQ8TCY0 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SMIM11BQ8TCY0 LSS-211ENST00000522411 2523 ntTSL 2 BASIC10.08□□□□□ -0.8
SMIM11BQ8TCY0 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SMIM11BQ8TCY0 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
SMIM11BQ8TCY0 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC10.08□□□□□ -0.8
SMIM11BQ8TCY0 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SMIM11BQ8TCY0 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC10.08□□□□□ -0.8
SMIM11BQ8TCY0 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
SMIM11BQ8TCY0 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC10.08□□□□□ -0.8
SMIM11BQ8TCY0 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SMIM11BQ8TCY0 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SMIM11BQ8TCY0 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SMIM11BQ8TCY0 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC10.08□□□□□ -0.8
SMIM11BQ8TCY0 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
SMIM11BQ8TCY0 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC10.08□□□□□ -0.8
SMIM11BQ8TCY0 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC10.08□□□□□ -0.8
SMIM11BQ8TCY0 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SMIM11BQ8TCY0 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
SMIM11BQ8TCY0 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC10.07□□□□□ -0.8
SMIM11BQ8TCY0 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SMIM11BQ8TCY0 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC10.07□□□□□ -0.8
SMIM11BQ8TCY0 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
SMIM11BQ8TCY0 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
SMIM11BQ8TCY0 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC10.07□□□□□ -0.8
SMIM11BQ8TCY0 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SMIM11BQ8TCY0 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SMIM11BQ8TCY0 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SMIM11BQ8TCY0 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SMIM11BQ8TCY0 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
SMIM11BQ8TCY0 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SMIM11BQ8TCY0 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC10.07□□□□□ -0.8
SMIM11BQ8TCY0 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC10.07□□□□□ -0.8
SMIM11BQ8TCY0 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SMIM11BQ8TCY0 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC10.07□□□□□ -0.8
SMIM11BQ8TCY0 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SMIM11BQ8TCY0 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
SMIM11BQ8TCY0 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
SMIM11BQ8TCY0 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
SMIM11BQ8TCY0 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC10.07□□□□□ -0.8
SMIM11BQ8TCY0 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
SMIM11BQ8TCY0 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
SMIM11BQ8TCY0 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
SMIM11BQ8TCY0 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
SMIM11BQ8TCY0 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC10.07□□□□□ -0.8
SMIM11BQ8TCY0 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SMIM11BQ8TCY0 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC10.07□□□□□ -0.8
SMIM11BQ8TCY0 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
SMIM11BQ8TCY0 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SMIM11BQ8TCY0 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
SMIM11BQ8TCY0 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SMIM11BQ8TCY0 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC10.07□□□□□ -0.8
SMIM11BQ8TCY0 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC10.07□□□□□ -0.8
SMIM11BQ8TCY0 TSSC2-201ENST00000450217 709 ntBASIC10.07□□□□□ -0.8
SMIM11BQ8TCY0 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
SMIM11BQ8TCY0 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
SMIM11BQ8TCY0 AC063952.2-201ENST00000498792 1227 ntBASIC10.07□□□□□ -0.8
SMIM11BQ8TCY0 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC10.07□□□□□ -0.8
SMIM11BQ8TCY0 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC10.07□□□□□ -0.8
SMIM11BQ8TCY0 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC10.07□□□□□ -0.8
SMIM11BQ8TCY0 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SMIM11BQ8TCY0 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC10.07□□□□□ -0.8
SMIM11BQ8TCY0 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
SMIM11BQ8TCY0 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SMIM11BQ8TCY0 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
SMIM11BQ8TCY0 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SMIM11BQ8TCY0 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SMIM11BQ8TCY0 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SMIM11BQ8TCY0 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms