Protein–RNA interactions for Protein: Q8NEB9

PIK3C3, Phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3Q8NEB9 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.56□□□□□ -0.08
PIK3C3Q8NEB9 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PIK3C3Q8NEB9 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PIK3C3Q8NEB9 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PIK3C3Q8NEB9 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PIK3C3Q8NEB9 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.56□□□□□ -0.08
PIK3C3Q8NEB9 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PIK3C3Q8NEB9 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PIK3C3Q8NEB9 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
PIK3C3Q8NEB9 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PIK3C3Q8NEB9 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PIK3C3Q8NEB9 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
PIK3C3Q8NEB9 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PIK3C3Q8NEB9 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
PIK3C3Q8NEB9 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PIK3C3Q8NEB9 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PIK3C3Q8NEB9 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PIK3C3Q8NEB9 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.56□□□□□ -0.08
PIK3C3Q8NEB9 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.56□□□□□ -0.08
PIK3C3Q8NEB9 CEND1P1-201ENST00000451006 455 ntBASIC14.56□□□□□ -0.08
PIK3C3Q8NEB9 PHKG1P2-201ENST00000457537 863 ntBASIC14.56□□□□□ -0.08
PIK3C3Q8NEB9 ALG1L5P-201ENST00000482043 771 ntBASIC14.56□□□□□ -0.08
PIK3C3Q8NEB9 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.56□□□□□ -0.08
PIK3C3Q8NEB9 AC092865.5-201ENST00000545435 363 ntBASIC14.56□□□□□ -0.08
PIK3C3Q8NEB9 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.56□□□□□ -0.08
PIK3C3Q8NEB9 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.56□□□□□ -0.08
PIK3C3Q8NEB9 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.56□□□□□ -0.08
PIK3C3Q8NEB9 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PIK3C3Q8NEB9 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.56□□□□□ -0.08
PIK3C3Q8NEB9 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.56□□□□□ -0.08
PIK3C3Q8NEB9 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.56□□□□□ -0.08
PIK3C3Q8NEB9 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PIK3C3Q8NEB9 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.56□□□□□ -0.08
PIK3C3Q8NEB9 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PIK3C3Q8NEB9 KRT8P37-201ENST00000451609 1420 ntBASIC14.56□□□□□ -0.08
PIK3C3Q8NEB9 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PIK3C3Q8NEB9 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PIK3C3Q8NEB9 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PIK3C3Q8NEB9 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
PIK3C3Q8NEB9 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PIK3C3Q8NEB9 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PIK3C3Q8NEB9 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PIK3C3Q8NEB9 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.56□□□□□ -0.08
PIK3C3Q8NEB9 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PIK3C3Q8NEB9 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PIK3C3Q8NEB9 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PIK3C3Q8NEB9 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
PIK3C3Q8NEB9 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
PIK3C3Q8NEB9 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.55□□□□□ -0.08
PIK3C3Q8NEB9 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
PIK3C3Q8NEB9 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
PIK3C3Q8NEB9 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.55□□□□□ -0.08
PIK3C3Q8NEB9 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
PIK3C3Q8NEB9 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
PIK3C3Q8NEB9 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
PIK3C3Q8NEB9 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PIK3C3Q8NEB9 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PIK3C3Q8NEB9 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PIK3C3Q8NEB9 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.55□□□□□ -0.08
PIK3C3Q8NEB9 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PIK3C3Q8NEB9 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
PIK3C3Q8NEB9 FAM8A3P-201ENST00000427218 844 ntBASIC14.55□□□□□ -0.08
PIK3C3Q8NEB9 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.55□□□□□ -0.08
PIK3C3Q8NEB9 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PIK3C3Q8NEB9 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.55□□□□□ -0.08
PIK3C3Q8NEB9 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.55□□□□□ -0.08
PIK3C3Q8NEB9 RNA5SP410-201ENST00000516285 106 ntBASIC14.55□□□□□ -0.08
PIK3C3Q8NEB9 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PIK3C3Q8NEB9 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.55□□□□□ -0.08
PIK3C3Q8NEB9 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
PIK3C3Q8NEB9 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PIK3C3Q8NEB9 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PIK3C3Q8NEB9 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.55□□□□□ -0.08
PIK3C3Q8NEB9 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PIK3C3Q8NEB9 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PIK3C3Q8NEB9 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.55□□□□□ -0.08
PIK3C3Q8NEB9 AC117489.1-201ENST00000625169 3217 ntBASIC14.55□□□□□ -0.08
PIK3C3Q8NEB9 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
PIK3C3Q8NEB9 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
PIK3C3Q8NEB9 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PIK3C3Q8NEB9 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PIK3C3Q8NEB9 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
PIK3C3Q8NEB9 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PIK3C3Q8NEB9 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PIK3C3Q8NEB9 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.55□□□□□ -0.08
PIK3C3Q8NEB9 AC015656.1-201ENST00000624209 3578 ntBASIC14.55□□□□□ -0.08
PIK3C3Q8NEB9 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PIK3C3Q8NEB9 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PIK3C3Q8NEB9 CYP4F24P-201ENST00000586049 1580 ntBASIC14.55□□□□□ -0.08
PIK3C3Q8NEB9 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PIK3C3Q8NEB9 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PIK3C3Q8NEB9 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PIK3C3Q8NEB9 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PIK3C3Q8NEB9 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
PIK3C3Q8NEB9 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
PIK3C3Q8NEB9 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PIK3C3Q8NEB9 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
PIK3C3Q8NEB9 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PIK3C3Q8NEB9 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.54□□□□□ -0.08
PIK3C3Q8NEB9 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms