Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC33Q8N5R6 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CCDC33Q8N5R6 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC33Q8N5R6 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.25■□□□□ 0.19
CCDC33Q8N5R6 AC007389.4-201ENST00000454674 793 ntBASIC16.25■□□□□ 0.19
CCDC33Q8N5R6 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.25■□□□□ 0.19
CCDC33Q8N5R6 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC33Q8N5R6 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.25■□□□□ 0.19
CCDC33Q8N5R6 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.25■□□□□ 0.19
CCDC33Q8N5R6 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.25■□□□□ 0.19
CCDC33Q8N5R6 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC16.25■□□□□ 0.19
CCDC33Q8N5R6 RARRES2P5-201ENST00000564013 466 ntBASIC16.25■□□□□ 0.19
CCDC33Q8N5R6 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.25■□□□□ 0.19
CCDC33Q8N5R6 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC33Q8N5R6 TMEM261P1-201ENST00000604899 340 ntBASIC16.25■□□□□ 0.19
CCDC33Q8N5R6 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC33Q8N5R6 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC33Q8N5R6 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.25■□□□□ 0.19
CCDC33Q8N5R6 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC33Q8N5R6 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.25■□□□□ 0.19
CCDC33Q8N5R6 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC33Q8N5R6 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC33Q8N5R6 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC33Q8N5R6 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.25■□□□□ 0.19
CCDC33Q8N5R6 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
CCDC33Q8N5R6 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC33Q8N5R6 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC33Q8N5R6 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC33Q8N5R6 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.24■□□□□ 0.19
CCDC33Q8N5R6 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC33Q8N5R6 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC33Q8N5R6 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC33Q8N5R6 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC33Q8N5R6 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC33Q8N5R6 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC33Q8N5R6 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.24■□□□□ 0.19
CCDC33Q8N5R6 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC33Q8N5R6 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC33Q8N5R6 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.24■□□□□ 0.19
CCDC33Q8N5R6 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.24■□□□□ 0.19
CCDC33Q8N5R6 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC33Q8N5R6 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CCDC33Q8N5R6 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.24■□□□□ 0.19
CCDC33Q8N5R6 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC16.24■□□□□ 0.19
CCDC33Q8N5R6 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.24■□□□□ 0.19
CCDC33Q8N5R6 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CCDC33Q8N5R6 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.24■□□□□ 0.19
CCDC33Q8N5R6 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC33Q8N5R6 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.24■□□□□ 0.19
CCDC33Q8N5R6 RRP7BP-205ENST00000566851 833 ntBASIC16.24■□□□□ 0.19
CCDC33Q8N5R6 MIR4259-201ENST00000584466 101 ntBASIC16.24■□□□□ 0.19
CCDC33Q8N5R6 LINC01115-203ENST00000606068 577 ntBASIC16.24■□□□□ 0.19
CCDC33Q8N5R6 AC063926.3-201ENST00000624734 5658 ntBASIC16.24■□□□□ 0.19
CCDC33Q8N5R6 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CCDC33Q8N5R6 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC33Q8N5R6 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC33Q8N5R6 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC33Q8N5R6 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC33Q8N5R6 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.24■□□□□ 0.19
CCDC33Q8N5R6 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.24■□□□□ 0.19
CCDC33Q8N5R6 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC33Q8N5R6 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC33Q8N5R6 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.24■□□□□ 0.19
CCDC33Q8N5R6 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.23■□□□□ 0.19
CCDC33Q8N5R6 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CCDC33Q8N5R6 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC33Q8N5R6 C18orf15-201ENST00000623680 2534 ntBASIC16.23■□□□□ 0.19
CCDC33Q8N5R6 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC33Q8N5R6 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC33Q8N5R6 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC33Q8N5R6 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.23■□□□□ 0.19
CCDC33Q8N5R6 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC33Q8N5R6 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CCDC33Q8N5R6 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC33Q8N5R6 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CCDC33Q8N5R6 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC33Q8N5R6 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC33Q8N5R6 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CCDC33Q8N5R6 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.23■□□□□ 0.19
CCDC33Q8N5R6 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC33Q8N5R6 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC33Q8N5R6 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC33Q8N5R6 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC33Q8N5R6 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC33Q8N5R6 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CCDC33Q8N5R6 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.23■□□□□ 0.19
CCDC33Q8N5R6 AC234783.1-201ENST00000441761 496 ntBASIC16.23■□□□□ 0.19
CCDC33Q8N5R6 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.23■□□□□ 0.19
CCDC33Q8N5R6 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CCDC33Q8N5R6 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.23■□□□□ 0.19
CCDC33Q8N5R6 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.23■□□□□ 0.19
CCDC33Q8N5R6 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.23■□□□□ 0.19
CCDC33Q8N5R6 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CCDC33Q8N5R6 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CCDC33Q8N5R6 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC33Q8N5R6 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC33Q8N5R6 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC33Q8N5R6 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC33Q8N5R6 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.23■□□□□ 0.19
CCDC33Q8N5R6 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms