Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHD1LQ86WJ1 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHD1LQ86WJ1 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHD1LQ86WJ1 SYS1-203ENST00000414310 795 ntTSL 3 BASIC19.05■□□□□ 0.64
CHD1LQ86WJ1 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC19.05■□□□□ 0.64
CHD1LQ86WJ1 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC19.05■□□□□ 0.64
CHD1LQ86WJ1 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC19.05■□□□□ 0.64
CHD1LQ86WJ1 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC19.05■□□□□ 0.64
CHD1LQ86WJ1 FTH1-202ENST00000526640 786 ntTSL 2 BASIC19.05■□□□□ 0.64
CHD1LQ86WJ1 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CHD1LQ86WJ1 AC135586.1-201ENST00000539323 574 ntBASIC19.05■□□□□ 0.64
CHD1LQ86WJ1 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC19.05■□□□□ 0.64
CHD1LQ86WJ1 SAMD11P1-201ENST00000571429 661 ntBASIC19.05■□□□□ 0.64
CHD1LQ86WJ1 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.05■□□□□ 0.64
CHD1LQ86WJ1 AC004790.1-201ENST00000612686 536 ntBASIC19.05■□□□□ 0.64
CHD1LQ86WJ1 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC19.05■□□□□ 0.64
CHD1LQ86WJ1 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHD1LQ86WJ1 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CHD1LQ86WJ1 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CHD1LQ86WJ1 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHD1LQ86WJ1 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CHD1LQ86WJ1 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHD1LQ86WJ1 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHD1LQ86WJ1 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC19.05■□□□□ 0.64
CHD1LQ86WJ1 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC19.05■□□□□ 0.64
CHD1LQ86WJ1 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CHD1LQ86WJ1 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHD1LQ86WJ1 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHD1LQ86WJ1 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHD1LQ86WJ1 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHD1LQ86WJ1 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
CHD1LQ86WJ1 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC19.05■□□□□ 0.64
CHD1LQ86WJ1 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC19.05■□□□□ 0.64
CHD1LQ86WJ1 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHD1LQ86WJ1 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHD1LQ86WJ1 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CHD1LQ86WJ1 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC19.04■□□□□ 0.64
CHD1LQ86WJ1 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHD1LQ86WJ1 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHD1LQ86WJ1 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CHD1LQ86WJ1 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHD1LQ86WJ1 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CHD1LQ86WJ1 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHD1LQ86WJ1 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHD1LQ86WJ1 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CHD1LQ86WJ1 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC19.04■□□□□ 0.64
CHD1LQ86WJ1 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHD1LQ86WJ1 AC022144.1-201ENST00000602255 1580 ntBASIC19.04■□□□□ 0.64
CHD1LQ86WJ1 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC19.04■□□□□ 0.64
CHD1LQ86WJ1 AC093512.1-201ENST00000617969 520 ntBASIC19.04■□□□□ 0.64
CHD1LQ86WJ1 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
CHD1LQ86WJ1 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC19.04■□□□□ 0.64
CHD1LQ86WJ1 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHD1LQ86WJ1 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHD1LQ86WJ1 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHD1LQ86WJ1 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHD1LQ86WJ1 RERG-209ENST00000546331 1383 ntTSL 2 BASIC19.04■□□□□ 0.64
CHD1LQ86WJ1 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHD1LQ86WJ1 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC19.04■□□□□ 0.64
CHD1LQ86WJ1 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHD1LQ86WJ1 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC19.04■□□□□ 0.64
CHD1LQ86WJ1 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHD1LQ86WJ1 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHD1LQ86WJ1 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHD1LQ86WJ1 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHD1LQ86WJ1 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHD1LQ86WJ1 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHD1LQ86WJ1 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC19.03■□□□□ 0.64
CHD1LQ86WJ1 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHD1LQ86WJ1 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHD1LQ86WJ1 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHD1LQ86WJ1 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CHD1LQ86WJ1 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CHD1LQ86WJ1 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHD1LQ86WJ1 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
CHD1LQ86WJ1 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.03■□□□□ 0.64
CHD1LQ86WJ1 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC19.03■□□□□ 0.64
CHD1LQ86WJ1 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC19.03■□□□□ 0.64
CHD1LQ86WJ1 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHD1LQ86WJ1 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CHD1LQ86WJ1 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHD1LQ86WJ1 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHD1LQ86WJ1 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC19.03■□□□□ 0.64
CHD1LQ86WJ1 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
CHD1LQ86WJ1 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC19.03■□□□□ 0.64
CHD1LQ86WJ1 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CHD1LQ86WJ1 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC19.03■□□□□ 0.64
CHD1LQ86WJ1 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHD1LQ86WJ1 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC19.03■□□□□ 0.64
CHD1LQ86WJ1 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHD1LQ86WJ1 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHD1LQ86WJ1 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHD1LQ86WJ1 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC19.03■□□□□ 0.64
CHD1LQ86WJ1 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHD1LQ86WJ1 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC19.03■□□□□ 0.64
CHD1LQ86WJ1 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC19.03■□□□□ 0.64
CHD1LQ86WJ1 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CHD1LQ86WJ1 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC19.02■□□□□ 0.64
CHD1LQ86WJ1 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC19.02■□□□□ 0.64
CHD1LQ86WJ1 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms