Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CSMD3Q7Z407 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CSMD3Q7Z407 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CSMD3Q7Z407 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CSMD3Q7Z407 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CSMD3Q7Z407 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC10.49□□□□□ -0.73
CSMD3Q7Z407 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CSMD3Q7Z407 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC10.49□□□□□ -0.73
CSMD3Q7Z407 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CSMD3Q7Z407 AC008723.1-201ENST00000506922 207 ntBASIC10.49□□□□□ -0.73
CSMD3Q7Z407 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC10.49□□□□□ -0.73
CSMD3Q7Z407 HKR1-225ENST00000592168 566 ntTSL 4 BASIC10.49□□□□□ -0.73
CSMD3Q7Z407 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
CSMD3Q7Z407 AP001527.2-201ENST00000614441 631 ntBASIC10.49□□□□□ -0.73
CSMD3Q7Z407 AC244250.3-201ENST00000620749 366 ntBASIC10.49□□□□□ -0.73
CSMD3Q7Z407 CMC2-224ENST00000630396 481 ntTSL 5 BASIC10.49□□□□□ -0.73
CSMD3Q7Z407 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CSMD3Q7Z407 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC10.49□□□□□ -0.73
CSMD3Q7Z407 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
CSMD3Q7Z407 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CSMD3Q7Z407 SHC1P1-201ENST00000425230 1745 ntBASIC10.49□□□□□ -0.73
CSMD3Q7Z407 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC10.49□□□□□ -0.73
CSMD3Q7Z407 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
CSMD3Q7Z407 TNRC18P3-201ENST00000441896 2691 ntBASIC10.49□□□□□ -0.73
CSMD3Q7Z407 PES1-204ENST00000402284 2144 ntTSL 5 BASIC10.49□□□□□ -0.73
CSMD3Q7Z407 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC10.49□□□□□ -0.73
CSMD3Q7Z407 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
CSMD3Q7Z407 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CSMD3Q7Z407 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC10.49□□□□□ -0.73
CSMD3Q7Z407 MIR4522-201ENST00000584932 87 ntBASIC10.49□□□□□ -0.73
CSMD3Q7Z407 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
CSMD3Q7Z407 FO393412.1-201ENST00000619841 382 ntBASIC10.49□□□□□ -0.73
CSMD3Q7Z407 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
CSMD3Q7Z407 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CSMD3Q7Z407 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
CSMD3Q7Z407 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CSMD3Q7Z407 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC10.49□□□□□ -0.73
CSMD3Q7Z407 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CSMD3Q7Z407 API5-202ENST00000420461 2009 ntTSL 2 BASIC10.48□□□□□ -0.73
CSMD3Q7Z407 AL627231.1-201ENST00000394467 1125 ntBASIC10.48□□□□□ -0.73
CSMD3Q7Z407 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CSMD3Q7Z407 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC10.48□□□□□ -0.73
CSMD3Q7Z407 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC10.48□□□□□ -0.73
CSMD3Q7Z407 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC10.48□□□□□ -0.73
CSMD3Q7Z407 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC10.48□□□□□ -0.73
CSMD3Q7Z407 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CSMD3Q7Z407 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
CSMD3Q7Z407 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC10.48□□□□□ -0.73
CSMD3Q7Z407 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CSMD3Q7Z407 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CSMD3Q7Z407 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
CSMD3Q7Z407 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
CSMD3Q7Z407 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CSMD3Q7Z407 CICP11-201ENST00000434745 2827 ntBASIC10.48□□□□□ -0.73
CSMD3Q7Z407 GCK-209ENST00000616242 2260 ntTSL 5 BASIC10.48□□□□□ -0.73
CSMD3Q7Z407 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CSMD3Q7Z407 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CSMD3Q7Z407 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CSMD3Q7Z407 HNRNPA1P41-201ENST00000397777 928 ntBASIC10.48□□□□□ -0.73
CSMD3Q7Z407 HPGD-203ENST00000422112 805 ntTSL 2 BASIC10.48□□□□□ -0.73
CSMD3Q7Z407 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CSMD3Q7Z407 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC10.48□□□□□ -0.73
CSMD3Q7Z407 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC10.48□□□□□ -0.73
CSMD3Q7Z407 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
CSMD3Q7Z407 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC10.48□□□□□ -0.73
CSMD3Q7Z407 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
CSMD3Q7Z407 AL031713.1-201ENST00000564813 661 ntBASIC10.48□□□□□ -0.73
CSMD3Q7Z407 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC10.48□□□□□ -0.73
CSMD3Q7Z407 REXO1L4P-201ENST00000605109 1937 ntBASIC10.48□□□□□ -0.73
CSMD3Q7Z407 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CSMD3Q7Z407 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC10.48□□□□□ -0.73
CSMD3Q7Z407 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
CSMD3Q7Z407 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CSMD3Q7Z407 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
CSMD3Q7Z407 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC10.48□□□□□ -0.73
CSMD3Q7Z407 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CSMD3Q7Z407 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CSMD3Q7Z407 AL627422.1-201ENST00000434104 580 ntBASIC10.48□□□□□ -0.73
CSMD3Q7Z407 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC10.48□□□□□ -0.73
CSMD3Q7Z407 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CSMD3Q7Z407 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
CSMD3Q7Z407 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CSMD3Q7Z407 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC10.48□□□□□ -0.73
CSMD3Q7Z407 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
CSMD3Q7Z407 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC10.48□□□□□ -0.73
CSMD3Q7Z407 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC10.48□□□□□ -0.73
CSMD3Q7Z407 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC10.48□□□□□ -0.73
CSMD3Q7Z407 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
CSMD3Q7Z407 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
CSMD3Q7Z407 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
CSMD3Q7Z407 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
CSMD3Q7Z407 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CSMD3Q7Z407 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CSMD3Q7Z407 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC10.47□□□□□ -0.73
CSMD3Q7Z407 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC10.47□□□□□ -0.73
CSMD3Q7Z407 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC10.47□□□□□ -0.73
CSMD3Q7Z407 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CSMD3Q7Z407 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC10.47□□□□□ -0.73
CSMD3Q7Z407 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC10.47□□□□□ -0.73
CSMD3Q7Z407 AC005041.3-201ENST00000606287 649 ntBASIC10.47□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms