Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTR9Q6PD62 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
CTR9Q6PD62 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CTR9Q6PD62 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CTR9Q6PD62 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTR9Q6PD62 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC18.31■□□□□ 0.52
CTR9Q6PD62 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTR9Q6PD62 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTR9Q6PD62 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC18.31■□□□□ 0.52
CTR9Q6PD62 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC18.31■□□□□ 0.52
CTR9Q6PD62 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTR9Q6PD62 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTR9Q6PD62 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC18.3■□□□□ 0.52
CTR9Q6PD62 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTR9Q6PD62 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CTR9Q6PD62 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CTR9Q6PD62 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTR9Q6PD62 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.3■□□□□ 0.52
CTR9Q6PD62 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CTR9Q6PD62 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC18.3■□□□□ 0.52
CTR9Q6PD62 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC18.3■□□□□ 0.52
CTR9Q6PD62 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC18.3■□□□□ 0.52
CTR9Q6PD62 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC18.3■□□□□ 0.52
CTR9Q6PD62 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC18.3■□□□□ 0.52
CTR9Q6PD62 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC18.3■□□□□ 0.52
CTR9Q6PD62 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC18.3■□□□□ 0.52
CTR9Q6PD62 GNRHR2-203ENST00000581100 1187 ntBASIC18.3■□□□□ 0.52
CTR9Q6PD62 AL359881.2-201ENST00000602973 570 ntBASIC18.3■□□□□ 0.52
CTR9Q6PD62 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC18.3■□□□□ 0.52
CTR9Q6PD62 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CTR9Q6PD62 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC18.3■□□□□ 0.52
CTR9Q6PD62 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC18.3■□□□□ 0.52
CTR9Q6PD62 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTR9Q6PD62 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC18.3■□□□□ 0.52
CTR9Q6PD62 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC18.3■□□□□ 0.52
CTR9Q6PD62 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTR9Q6PD62 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC18.3■□□□□ 0.52
CTR9Q6PD62 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CTR9Q6PD62 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CTR9Q6PD62 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CTR9Q6PD62 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTR9Q6PD62 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTR9Q6PD62 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTR9Q6PD62 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTR9Q6PD62 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CTR9Q6PD62 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTR9Q6PD62 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTR9Q6PD62 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTR9Q6PD62 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC18.29■□□□□ 0.52
CTR9Q6PD62 PDIA3P1-201ENST00000471856 1510 ntBASIC18.29■□□□□ 0.52
CTR9Q6PD62 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTR9Q6PD62 AC063926.3-201ENST00000624734 5658 ntBASIC18.29■□□□□ 0.52
CTR9Q6PD62 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC18.29■□□□□ 0.52
CTR9Q6PD62 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTR9Q6PD62 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTR9Q6PD62 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTR9Q6PD62 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CTR9Q6PD62 LBX2-201ENST00000341396 886 ntTSL 3 BASIC18.29■□□□□ 0.52
CTR9Q6PD62 RNU1-114P-201ENST00000365297 166 ntBASIC18.29■□□□□ 0.52
CTR9Q6PD62 MIR658-201ENST00000385210 100 ntBASIC18.29■□□□□ 0.52
CTR9Q6PD62 PGGT1BP2-201ENST00000398621 1028 ntBASIC18.29■□□□□ 0.52
CTR9Q6PD62 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CTR9Q6PD62 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC18.29■□□□□ 0.52
CTR9Q6PD62 KRT43P-201ENST00000434019 910 ntBASIC18.29■□□□□ 0.52
CTR9Q6PD62 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CTR9Q6PD62 AC234783.1-201ENST00000441761 496 ntBASIC18.29■□□□□ 0.52
CTR9Q6PD62 AL355864.2-201ENST00000447420 863 ntBASIC18.29■□□□□ 0.52
CTR9Q6PD62 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC18.29■□□□□ 0.52
CTR9Q6PD62 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC18.29■□□□□ 0.52
CTR9Q6PD62 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC18.29■□□□□ 0.52
CTR9Q6PD62 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC18.29■□□□□ 0.52
CTR9Q6PD62 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTR9Q6PD62 PRSS30P-206ENST00000641773 873 ntBASIC18.29■□□□□ 0.52
CTR9Q6PD62 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTR9Q6PD62 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CTR9Q6PD62 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CTR9Q6PD62 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CTR9Q6PD62 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
CTR9Q6PD62 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTR9Q6PD62 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CTR9Q6PD62 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CTR9Q6PD62 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC18.29■□□□□ 0.52
CTR9Q6PD62 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CTR9Q6PD62 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTR9Q6PD62 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTR9Q6PD62 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTR9Q6PD62 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
CTR9Q6PD62 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CTR9Q6PD62 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTR9Q6PD62 MYB-201ENST00000316528 3571 ntTSL 5 BASIC18.29■□□□□ 0.52
CTR9Q6PD62 MYB-241ENST00000616088 3573 ntTSL 5 BASIC18.29■□□□□ 0.52
CTR9Q6PD62 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CTR9Q6PD62 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CTR9Q6PD62 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CTR9Q6PD62 CICP11-201ENST00000434745 2827 ntBASIC18.28■□□□□ 0.52
CTR9Q6PD62 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTR9Q6PD62 LINC02228-204ENST00000642115 2962 ntBASIC18.28■□□□□ 0.52
CTR9Q6PD62 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CTR9Q6PD62 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTR9Q6PD62 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms