Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
UBA52P62987 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
UBA52P62987 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.44□□□□□ -0.26
UBA52P62987 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
UBA52P62987 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
UBA52P62987 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
UBA52P62987 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
UBA52P62987 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
UBA52P62987 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.44□□□□□ -0.26
UBA52P62987 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
UBA52P62987 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
UBA52P62987 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
UBA52P62987 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
UBA52P62987 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
UBA52P62987 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.44□□□□□ -0.26
UBA52P62987 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.44□□□□□ -0.26
UBA52P62987 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
UBA52P62987 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
UBA52P62987 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
UBA52P62987 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.44□□□□□ -0.26
UBA52P62987 HCG4-201ENST00000418983 998 ntBASIC13.44□□□□□ -0.26
UBA52P62987 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC13.44□□□□□ -0.26
UBA52P62987 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.44□□□□□ -0.26
UBA52P62987 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.44□□□□□ -0.26
UBA52P62987 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
UBA52P62987 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.44□□□□□ -0.26
UBA52P62987 ALG1L8P-201ENST00000533887 760 ntBASIC13.44□□□□□ -0.26
UBA52P62987 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
UBA52P62987 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.44□□□□□ -0.26
UBA52P62987 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.44□□□□□ -0.26
UBA52P62987 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.44□□□□□ -0.26
UBA52P62987 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
UBA52P62987 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.44□□□□□ -0.26
UBA52P62987 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
UBA52P62987 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
UBA52P62987 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
UBA52P62987 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
UBA52P62987 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.44□□□□□ -0.26
UBA52P62987 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
UBA52P62987 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
UBA52P62987 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.44□□□□□ -0.26
UBA52P62987 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
UBA52P62987 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
UBA52P62987 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
UBA52P62987 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
UBA52P62987 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.44□□□□□ -0.26
UBA52P62987 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
UBA52P62987 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.43□□□□□ -0.26
UBA52P62987 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
UBA52P62987 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
UBA52P62987 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
UBA52P62987 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
UBA52P62987 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.43□□□□□ -0.26
UBA52P62987 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.43□□□□□ -0.26
UBA52P62987 AC009090.5-201ENST00000624886 2285 ntBASIC13.43□□□□□ -0.26
UBA52P62987 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
UBA52P62987 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
UBA52P62987 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
UBA52P62987 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
UBA52P62987 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
UBA52P62987 FOS-208ENST00000555686 1496 ntTSL 2 BASIC13.43□□□□□ -0.26
UBA52P62987 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
UBA52P62987 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
UBA52P62987 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.43□□□□□ -0.26
UBA52P62987 REXO1L2P-201ENST00000425429 2069 ntBASIC13.43□□□□□ -0.26
UBA52P62987 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.43□□□□□ -0.26
UBA52P62987 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
UBA52P62987 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
UBA52P62987 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
UBA52P62987 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
UBA52P62987 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
UBA52P62987 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
UBA52P62987 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
UBA52P62987 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
UBA52P62987 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
UBA52P62987 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
UBA52P62987 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
UBA52P62987 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.43□□□□□ -0.26
UBA52P62987 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
UBA52P62987 GSAP-205ENST00000430584 600 ntTSL 5 BASIC13.43□□□□□ -0.26
UBA52P62987 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
UBA52P62987 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.43□□□□□ -0.26
UBA52P62987 AC097493.3-201ENST00000509725 367 ntBASIC13.43□□□□□ -0.26
UBA52P62987 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.43□□□□□ -0.26
UBA52P62987 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.43□□□□□ -0.26
UBA52P62987 PTENP1-202ENST00000532280 3996 ntBASIC13.43□□□□□ -0.26
UBA52P62987 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
UBA52P62987 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
UBA52P62987 AC008267.7-201ENST00000624570 1194 ntBASIC13.43□□□□□ -0.26
UBA52P62987 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.43□□□□□ -0.26
UBA52P62987 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
UBA52P62987 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
UBA52P62987 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
UBA52P62987 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.43□□□□□ -0.26
UBA52P62987 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.43□□□□□ -0.26
UBA52P62987 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.43□□□□□ -0.26
UBA52P62987 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
UBA52P62987 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
UBA52P62987 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
UBA52P62987 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms