Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2NP61088 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2NP61088 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2NP61088 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2NP61088 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2NP61088 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.61□□□□□ -0.23
UBE2NP61088 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2NP61088 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2NP61088 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
UBE2NP61088 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2NP61088 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.61□□□□□ -0.23
UBE2NP61088 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2NP61088 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2NP61088 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
UBE2NP61088 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
UBE2NP61088 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2NP61088 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.61□□□□□ -0.23
UBE2NP61088 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2NP61088 AL442647.2-201ENST00000429864 857 ntBASIC13.61□□□□□ -0.23
UBE2NP61088 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.61□□□□□ -0.23
UBE2NP61088 RN7SL752P-201ENST00000463779 287 ntBASIC13.61□□□□□ -0.23
UBE2NP61088 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.61□□□□□ -0.23
UBE2NP61088 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.61□□□□□ -0.23
UBE2NP61088 AC092552.1-201ENST00000547243 906 ntBASIC13.61□□□□□ -0.23
UBE2NP61088 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.61□□□□□ -0.23
UBE2NP61088 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.61□□□□□ -0.23
UBE2NP61088 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.61□□□□□ -0.23
UBE2NP61088 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.61□□□□□ -0.23
UBE2NP61088 AC105233.6-201ENST00000642093 218 ntBASIC13.61□□□□□ -0.23
UBE2NP61088 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2NP61088 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2NP61088 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2NP61088 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2NP61088 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.61□□□□□ -0.23
UBE2NP61088 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2NP61088 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2NP61088 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2NP61088 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2NP61088 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2NP61088 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.61□□□□□ -0.23
UBE2NP61088 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC13.61□□□□□ -0.23
UBE2NP61088 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2NP61088 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2NP61088 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2NP61088 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.61□□□□□ -0.23
UBE2NP61088 AC087481.3-201ENST00000602886 1894 ntBASIC13.61□□□□□ -0.23
UBE2NP61088 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2NP61088 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2NP61088 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2NP61088 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2NP61088 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2NP61088 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
UBE2NP61088 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2NP61088 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
UBE2NP61088 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
UBE2NP61088 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2NP61088 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2NP61088 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2NP61088 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2NP61088 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2NP61088 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.6□□□□□ -0.23
UBE2NP61088 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
UBE2NP61088 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2NP61088 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2NP61088 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2NP61088 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.6□□□□□ -0.23
UBE2NP61088 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2NP61088 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2NP61088 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.6□□□□□ -0.23
UBE2NP61088 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.6□□□□□ -0.23
UBE2NP61088 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2NP61088 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2NP61088 DGCR5-201ENST00000399539 862 ntBASIC13.6□□□□□ -0.23
UBE2NP61088 RPL5P21-201ENST00000404620 815 ntBASIC13.6□□□□□ -0.23
UBE2NP61088 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
UBE2NP61088 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.6□□□□□ -0.23
UBE2NP61088 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.6□□□□□ -0.23
UBE2NP61088 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.6□□□□□ -0.23
UBE2NP61088 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2NP61088 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2NP61088 ELK1P1-201ENST00000485699 580 ntBASIC13.6□□□□□ -0.23
UBE2NP61088 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
UBE2NP61088 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.6□□□□□ -0.23
UBE2NP61088 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.6□□□□□ -0.23
UBE2NP61088 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2NP61088 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.6□□□□□ -0.23
UBE2NP61088 WASH4P-201ENST00000564273 1246 ntBASIC13.6□□□□□ -0.23
UBE2NP61088 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.6□□□□□ -0.23
UBE2NP61088 MIR8072-201ENST00000614241 80 ntBASIC13.6□□□□□ -0.23
UBE2NP61088 AC007950.2-201ENST00000615045 2347 ntBASIC13.6□□□□□ -0.23
UBE2NP61088 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.6□□□□□ -0.23
UBE2NP61088 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.6□□□□□ -0.23
UBE2NP61088 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2NP61088 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
UBE2NP61088 AC023824.1-201ENST00000562945 2975 ntBASIC13.6□□□□□ -0.23
UBE2NP61088 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2NP61088 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2NP61088 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.6□□□□□ -0.23
UBE2NP61088 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2NP61088 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms