Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
RIPPLY3P57055 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RIPPLY3P57055 HPGD-203ENST00000422112 805 ntTSL 2 BASIC12.89□□□□□ -0.35
RIPPLY3P57055 HCG27-204ENST00000424675 895 ntTSL 3 BASIC12.89□□□□□ -0.35
RIPPLY3P57055 FAM197Y7-201ENST00000432892 766 ntBASIC12.89□□□□□ -0.35
RIPPLY3P57055 CEP164P1-201ENST00000455142 418 ntBASIC12.89□□□□□ -0.35
RIPPLY3P57055 AC022217.1-201ENST00000521069 738 ntBASIC12.89□□□□□ -0.35
RIPPLY3P57055 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC12.89□□□□□ -0.35
RIPPLY3P57055 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RIPPLY3P57055 AC120045.2-201ENST00000567334 178 ntBASIC12.89□□□□□ -0.35
RIPPLY3P57055 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC12.89□□□□□ -0.35
RIPPLY3P57055 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
RIPPLY3P57055 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC12.89□□□□□ -0.35
RIPPLY3P57055 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC12.89□□□□□ -0.35
RIPPLY3P57055 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RIPPLY3P57055 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RIPPLY3P57055 TOP3BP1-201ENST00000420768 1380 ntBASIC12.89□□□□□ -0.35
RIPPLY3P57055 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RIPPLY3P57055 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RIPPLY3P57055 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
RIPPLY3P57055 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
RIPPLY3P57055 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC12.89□□□□□ -0.35
RIPPLY3P57055 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RIPPLY3P57055 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RIPPLY3P57055 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC12.89□□□□□ -0.35
RIPPLY3P57055 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RIPPLY3P57055 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RIPPLY3P57055 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RIPPLY3P57055 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RIPPLY3P57055 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RIPPLY3P57055 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
RIPPLY3P57055 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC12.89□□□□□ -0.35
RIPPLY3P57055 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RIPPLY3P57055 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RIPPLY3P57055 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RIPPLY3P57055 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC12.88□□□□□ -0.35
RIPPLY3P57055 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RIPPLY3P57055 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
RIPPLY3P57055 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC12.88□□□□□ -0.35
RIPPLY3P57055 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
RIPPLY3P57055 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RIPPLY3P57055 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
RIPPLY3P57055 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
RIPPLY3P57055 CICP14-201ENST00000629111 2732 ntBASIC12.88□□□□□ -0.35
RIPPLY3P57055 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
RIPPLY3P57055 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RIPPLY3P57055 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RIPPLY3P57055 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RIPPLY3P57055 PKIG-203ENST00000372887 769 ntTSL 3 BASIC12.88□□□□□ -0.35
RIPPLY3P57055 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RIPPLY3P57055 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
RIPPLY3P57055 MIR1202-201ENST00000408529 83 ntBASIC12.88□□□□□ -0.35
RIPPLY3P57055 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
RIPPLY3P57055 HNRNPA1P63-201ENST00000427917 963 ntBASIC12.88□□□□□ -0.35
RIPPLY3P57055 AC012362.1-201ENST00000434906 739 ntBASIC12.88□□□□□ -0.35
RIPPLY3P57055 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RIPPLY3P57055 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC12.88□□□□□ -0.35
RIPPLY3P57055 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RIPPLY3P57055 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC12.88□□□□□ -0.35
RIPPLY3P57055 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC12.88□□□□□ -0.35
RIPPLY3P57055 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC12.88□□□□□ -0.35
RIPPLY3P57055 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC12.88□□□□□ -0.35
RIPPLY3P57055 NEU3-205ENST00000531619 582 ntTSL 5 BASIC12.88□□□□□ -0.35
RIPPLY3P57055 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC12.88□□□□□ -0.35
RIPPLY3P57055 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RIPPLY3P57055 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC12.88□□□□□ -0.35
RIPPLY3P57055 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC12.88□□□□□ -0.35
RIPPLY3P57055 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RIPPLY3P57055 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC12.88□□□□□ -0.35
RIPPLY3P57055 AL645939.5-201ENST00000606834 243 ntBASIC12.88□□□□□ -0.35
RIPPLY3P57055 AC107373.2-201ENST00000607735 490 ntBASIC12.88□□□□□ -0.35
RIPPLY3P57055 AC021016.3-201ENST00000608367 477 ntBASIC12.88□□□□□ -0.35
RIPPLY3P57055 AL132780.4-201ENST00000624870 1135 ntBASIC12.88□□□□□ -0.35
RIPPLY3P57055 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
RIPPLY3P57055 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC12.88□□□□□ -0.35
RIPPLY3P57055 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC12.88□□□□□ -0.35
RIPPLY3P57055 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
RIPPLY3P57055 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RIPPLY3P57055 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
RIPPLY3P57055 AP001094.4-201ENST00000579008 2176 ntBASIC12.88□□□□□ -0.35
RIPPLY3P57055 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC12.88□□□□□ -0.35
RIPPLY3P57055 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
RIPPLY3P57055 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RIPPLY3P57055 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
RIPPLY3P57055 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RIPPLY3P57055 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RIPPLY3P57055 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RIPPLY3P57055 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RIPPLY3P57055 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RIPPLY3P57055 CICP4-201ENST00000447359 2812 ntBASIC12.88□□□□□ -0.35
RIPPLY3P57055 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RIPPLY3P57055 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RIPPLY3P57055 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RIPPLY3P57055 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
RIPPLY3P57055 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.88□□□□□ -0.35
RIPPLY3P57055 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC12.88□□□□□ -0.35
RIPPLY3P57055 MSTO2P-201ENST00000314835 1709 ntBASIC12.88□□□□□ -0.35
RIPPLY3P57055 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC12.88□□□□□ -0.35
RIPPLY3P57055 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
RIPPLY3P57055 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms