Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC19.6■□□□□ 0.73
BRPF1P55201 ACKR1-201ENST00000368121 1240 ntBASIC19.6■□□□□ 0.73
BRPF1P55201 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
BRPF1P55201 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC19.6■□□□□ 0.73
BRPF1P55201 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC19.6■□□□□ 0.73
BRPF1P55201 C1QBPP1-201ENST00000400117 770 ntBASIC19.6■□□□□ 0.73
BRPF1P55201 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC19.6■□□□□ 0.73
BRPF1P55201 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
BRPF1P55201 AC234783.1-201ENST00000441761 496 ntBASIC19.6■□□□□ 0.73
BRPF1P55201 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC19.6■□□□□ 0.73
BRPF1P55201 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRPF1P55201 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC19.6■□□□□ 0.73
BRPF1P55201 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC19.6■□□□□ 0.73
BRPF1P55201 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC19.6■□□□□ 0.73
BRPF1P55201 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC19.6■□□□□ 0.73
BRPF1P55201 RPSAP52-203ENST00000622976 1023 ntBASIC19.6■□□□□ 0.73
BRPF1P55201 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC19.6■□□□□ 0.73
BRPF1P55201 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC19.6■□□□□ 0.73
BRPF1P55201 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRPF1P55201 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRPF1P55201 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRPF1P55201 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRPF1P55201 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRPF1P55201 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRPF1P55201 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC19.6■□□□□ 0.73
BRPF1P55201 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRPF1P55201 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC19.6■□□□□ 0.73
BRPF1P55201 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
BRPF1P55201 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
BRPF1P55201 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
BRPF1P55201 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
BRPF1P55201 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC19.59■□□□□ 0.73
BRPF1P55201 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC19.59■□□□□ 0.73
BRPF1P55201 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BRPF1P55201 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
BRPF1P55201 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BRPF1P55201 AL158070.2-201ENST00000623713 1621 ntBASIC19.59■□□□□ 0.73
BRPF1P55201 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
BRPF1P55201 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
BRPF1P55201 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC19.59■□□□□ 0.73
BRPF1P55201 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
BRPF1P55201 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
BRPF1P55201 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BRPF1P55201 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
BRPF1P55201 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BRPF1P55201 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC19.59■□□□□ 0.73
BRPF1P55201 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BRPF1P55201 RN7SL837P-201ENST00000463010 287 ntBASIC19.59■□□□□ 0.73
BRPF1P55201 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
BRPF1P55201 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
BRPF1P55201 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
BRPF1P55201 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
BRPF1P55201 WFDC1-204ENST00000613603 549 ntBASIC19.59■□□□□ 0.73
BRPF1P55201 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
BRPF1P55201 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC19.59■□□□□ 0.73
BRPF1P55201 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
BRPF1P55201 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC19.59■□□□□ 0.73
BRPF1P55201 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BRPF1P55201 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BRPF1P55201 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC19.59■□□□□ 0.73
BRPF1P55201 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC19.59■□□□□ 0.73
BRPF1P55201 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC19.59■□□□□ 0.73
BRPF1P55201 POR-201ENST00000394893 2532 ntTSL 5 BASIC19.59■□□□□ 0.73
BRPF1P55201 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BRPF1P55201 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
BRPF1P55201 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
BRPF1P55201 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
BRPF1P55201 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
BRPF1P55201 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
BRPF1P55201 LINC00528-201ENST00000600723 2160 ntBASIC19.59■□□□□ 0.73
BRPF1P55201 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC19.59■□□□□ 0.73
BRPF1P55201 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
BRPF1P55201 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.73
BRPF1P55201 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
BRPF1P55201 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
BRPF1P55201 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC19.58■□□□□ 0.73
BRPF1P55201 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
BRPF1P55201 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
BRPF1P55201 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
BRPF1P55201 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
BRPF1P55201 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
BRPF1P55201 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
BRPF1P55201 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
BRPF1P55201 GPI-205ENST00000586425 1799 ntTSL 5 BASIC19.58■□□□□ 0.73
BRPF1P55201 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
BRPF1P55201 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
BRPF1P55201 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC19.58■□□□□ 0.73
BRPF1P55201 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
BRPF1P55201 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
BRPF1P55201 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
BRPF1P55201 BRF1-202ENST00000379932 884 ntTSL 5 BASIC19.58■□□□□ 0.72
BRPF1P55201 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC19.58■□□□□ 0.72
BRPF1P55201 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC19.58■□□□□ 0.72
BRPF1P55201 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC19.58■□□□□ 0.72
BRPF1P55201 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC19.58■□□□□ 0.72
BRPF1P55201 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC19.58■□□□□ 0.72
BRPF1P55201 IFT20-206ENST00000578122 834 ntTSL 2 BASIC19.58■□□□□ 0.72
BRPF1P55201 IFT20-208ENST00000578985 831 ntTSL 3 BASIC19.58■□□□□ 0.72
BRPF1P55201 CLUHP6-201ENST00000580789 941 ntBASIC19.58■□□□□ 0.72
BRPF1P55201 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms