Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.98■□□□□ 0.31
PMS1P54277 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PMS1P54277 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PMS1P54277 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.98■□□□□ 0.31
PMS1P54277 IGHV3-42-201ENST00000520410 361 ntBASIC16.98■□□□□ 0.31
PMS1P54277 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.98■□□□□ 0.31
PMS1P54277 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PMS1P54277 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.98■□□□□ 0.31
PMS1P54277 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.98■□□□□ 0.31
PMS1P54277 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.98■□□□□ 0.31
PMS1P54277 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.98■□□□□ 0.31
PMS1P54277 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.98■□□□□ 0.31
PMS1P54277 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PMS1P54277 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.98■□□□□ 0.31
PMS1P54277 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.98■□□□□ 0.31
PMS1P54277 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.98■□□□□ 0.31
PMS1P54277 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PMS1P54277 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
PMS1P54277 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
PMS1P54277 AC018529.2-202ENST00000611482 3087 ntBASIC16.98■□□□□ 0.31
PMS1P54277 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.98■□□□□ 0.31
PMS1P54277 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PMS1P54277 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PMS1P54277 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PMS1P54277 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PMS1P54277 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PMS1P54277 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PMS1P54277 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PMS1P54277 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
PMS1P54277 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
PMS1P54277 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PMS1P54277 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PMS1P54277 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PMS1P54277 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PMS1P54277 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PMS1P54277 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PMS1P54277 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PMS1P54277 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.97■□□□□ 0.31
PMS1P54277 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PMS1P54277 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PMS1P54277 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.97■□□□□ 0.31
PMS1P54277 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.97■□□□□ 0.31
PMS1P54277 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
PMS1P54277 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
PMS1P54277 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PMS1P54277 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.97■□□□□ 0.31
PMS1P54277 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PMS1P54277 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PMS1P54277 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PMS1P54277 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PMS1P54277 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PMS1P54277 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PMS1P54277 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PMS1P54277 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PMS1P54277 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.97■□□□□ 0.31
PMS1P54277 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PMS1P54277 FAM8A3P-201ENST00000427218 844 ntBASIC16.97■□□□□ 0.31
PMS1P54277 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PMS1P54277 AC055876.3-201ENST00000431496 288 ntBASIC16.97■□□□□ 0.31
PMS1P54277 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.97■□□□□ 0.31
PMS1P54277 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.97■□□□□ 0.31
PMS1P54277 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
PMS1P54277 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.97■□□□□ 0.31
PMS1P54277 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.97■□□□□ 0.31
PMS1P54277 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PMS1P54277 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.97■□□□□ 0.31
PMS1P54277 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
PMS1P54277 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PMS1P54277 AC138649.4-201ENST00000612222 287 ntBASIC16.97■□□□□ 0.31
PMS1P54277 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
PMS1P54277 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PMS1P54277 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PMS1P54277 MTHFR-210ENST00000641407 2387 ntBASIC16.97■□□□□ 0.31
PMS1P54277 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PMS1P54277 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
PMS1P54277 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PMS1P54277 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.97■□□□□ 0.31
PMS1P54277 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.97■□□□□ 0.31
PMS1P54277 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PMS1P54277 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PMS1P54277 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.97■□□□□ 0.31
PMS1P54277 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PMS1P54277 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PMS1P54277 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PMS1P54277 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PMS1P54277 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PMS1P54277 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.97■□□□□ 0.31
PMS1P54277 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PMS1P54277 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC16.97■□□□□ 0.31
PMS1P54277 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PMS1P54277 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PMS1P54277 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PMS1P54277 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.96■□□□□ 0.31
PMS1P54277 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PMS1P54277 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC16.96■□□□□ 0.31
PMS1P54277 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.96■□□□□ 0.31
PMS1P54277 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
PMS1P54277 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PMS1P54277 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PMS1P54277 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms