Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
SLC25A1P53007 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SLC25A1P53007 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SLC25A1P53007 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
SLC25A1P53007 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SLC25A1P53007 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SLC25A1P53007 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SLC25A1P53007 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SLC25A1P53007 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SLC25A1P53007 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
SLC25A1P53007 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC13.72□□□□□ -0.21
SLC25A1P53007 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SLC25A1P53007 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
SLC25A1P53007 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SLC25A1P53007 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
SLC25A1P53007 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SLC25A1P53007 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SLC25A1P53007 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SLC25A1P53007 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SLC25A1P53007 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.72□□□□□ -0.21
SLC25A1P53007 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SLC25A1P53007 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SLC25A1P53007 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
SLC25A1P53007 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SLC25A1P53007 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.72□□□□□ -0.21
SLC25A1P53007 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.72□□□□□ -0.21
SLC25A1P53007 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.72□□□□□ -0.21
SLC25A1P53007 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.72□□□□□ -0.21
SLC25A1P53007 AP006288.1-201ENST00000446065 395 ntBASIC13.72□□□□□ -0.21
SLC25A1P53007 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC13.72□□□□□ -0.21
SLC25A1P53007 DHDH-204ENST00000523250 634 ntTSL 5 BASIC13.72□□□□□ -0.21
SLC25A1P53007 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.72□□□□□ -0.21
SLC25A1P53007 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC13.72□□□□□ -0.21
SLC25A1P53007 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.72□□□□□ -0.21
SLC25A1P53007 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SLC25A1P53007 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.72□□□□□ -0.21
SLC25A1P53007 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC13.72□□□□□ -0.21
SLC25A1P53007 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SLC25A1P53007 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.72□□□□□ -0.21
SLC25A1P53007 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SLC25A1P53007 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SLC25A1P53007 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.72□□□□□ -0.21
SLC25A1P53007 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.72□□□□□ -0.21
SLC25A1P53007 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.72□□□□□ -0.21
SLC25A1P53007 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.72□□□□□ -0.21
SLC25A1P53007 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SLC25A1P53007 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SLC25A1P53007 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.72□□□□□ -0.21
SLC25A1P53007 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SLC25A1P53007 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SLC25A1P53007 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
SLC25A1P53007 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SLC25A1P53007 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.72□□□□□ -0.21
SLC25A1P53007 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SLC25A1P53007 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SLC25A1P53007 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SLC25A1P53007 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SLC25A1P53007 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
SLC25A1P53007 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
SLC25A1P53007 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SLC25A1P53007 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SLC25A1P53007 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
SLC25A1P53007 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SLC25A1P53007 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.71□□□□□ -0.21
SLC25A1P53007 OR2I1P-209ENST00000641730 5365 ntBASIC13.71□□□□□ -0.21
SLC25A1P53007 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
SLC25A1P53007 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SLC25A1P53007 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
SLC25A1P53007 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SLC25A1P53007 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SLC25A1P53007 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SLC25A1P53007 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.71□□□□□ -0.21
SLC25A1P53007 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
SLC25A1P53007 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SLC25A1P53007 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SLC25A1P53007 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SLC25A1P53007 GRK6P1-201ENST00000400595 1711 ntBASIC13.71□□□□□ -0.21
SLC25A1P53007 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SLC25A1P53007 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SLC25A1P53007 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SLC25A1P53007 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.71□□□□□ -0.21
SLC25A1P53007 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SLC25A1P53007 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SLC25A1P53007 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SLC25A1P53007 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.71□□□□□ -0.21
SLC25A1P53007 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
SLC25A1P53007 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.71□□□□□ -0.21
SLC25A1P53007 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SLC25A1P53007 HLA-J-203ENST00000494367 1087 ntBASIC13.71□□□□□ -0.21
SLC25A1P53007 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.71□□□□□ -0.21
SLC25A1P53007 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.71□□□□□ -0.21
SLC25A1P53007 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC13.71□□□□□ -0.21
SLC25A1P53007 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
SLC25A1P53007 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SLC25A1P53007 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.71□□□□□ -0.21
SLC25A1P53007 AL138828.2-201ENST00000615812 383 ntBASIC13.71□□□□□ -0.21
SLC25A1P53007 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.71□□□□□ -0.21
SLC25A1P53007 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.71□□□□□ -0.21
SLC25A1P53007 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SLC25A1P53007 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms