Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.3■□□□□ 0.2
TUBP50607 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.3■□□□□ 0.2
TUBP50607 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.3■□□□□ 0.2
TUBP50607 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TUBP50607 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TUBP50607 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBP50607 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.29■□□□□ 0.2
TUBP50607 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
TUBP50607 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
TUBP50607 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBP50607 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TUBP50607 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.29■□□□□ 0.2
TUBP50607 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBP50607 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBP50607 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TUBP50607 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.29■□□□□ 0.2
TUBP50607 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
TUBP50607 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBP50607 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TUBP50607 AC244107.1-201ENST00000442033 332 ntBASIC16.29■□□□□ 0.2
TUBP50607 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.29■□□□□ 0.2
TUBP50607 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.29■□□□□ 0.2
TUBP50607 VDAC1P7-201ENST00000462417 847 ntBASIC16.29■□□□□ 0.2
TUBP50607 AC026410.3-201ENST00000514280 936 ntBASIC16.29■□□□□ 0.2
TUBP50607 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.29■□□□□ 0.2
TUBP50607 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TUBP50607 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.29■□□□□ 0.2
TUBP50607 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.29■□□□□ 0.2
TUBP50607 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.29■□□□□ 0.2
TUBP50607 RPSAP52-203ENST00000622976 1023 ntBASIC16.29■□□□□ 0.2
TUBP50607 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.29■□□□□ 0.2
TUBP50607 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBP50607 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBP50607 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TUBP50607 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBP50607 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBP50607 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBP50607 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TUBP50607 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.29■□□□□ 0.2
TUBP50607 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.29■□□□□ 0.2
TUBP50607 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBP50607 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
TUBP50607 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBP50607 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
TUBP50607 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TUBP50607 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBP50607 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.29■□□□□ 0.2
TUBP50607 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.29■□□□□ 0.2
TUBP50607 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBP50607 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TUBP50607 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TUBP50607 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TUBP50607 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TUBP50607 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TUBP50607 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.28■□□□□ 0.2
TUBP50607 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TUBP50607 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TUBP50607 AL359258.3-201ENST00000622910 2331 ntBASIC16.28■□□□□ 0.2
TUBP50607 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
TUBP50607 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
TUBP50607 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TUBP50607 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TUBP50607 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TUBP50607 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TUBP50607 C1QBPP1-201ENST00000400117 770 ntBASIC16.28■□□□□ 0.2
TUBP50607 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TUBP50607 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TUBP50607 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TUBP50607 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TUBP50607 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.28■□□□□ 0.2
TUBP50607 ACTG1P3-201ENST00000431775 1114 ntBASIC16.28■□□□□ 0.2
TUBP50607 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.28■□□□□ 0.2
TUBP50607 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.28■□□□□ 0.2
TUBP50607 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TUBP50607 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TUBP50607 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.28■□□□□ 0.2
TUBP50607 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.28■□□□□ 0.2
TUBP50607 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.28■□□□□ 0.2
TUBP50607 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.28■□□□□ 0.2
TUBP50607 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.28■□□□□ 0.2
TUBP50607 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.28■□□□□ 0.2
TUBP50607 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TUBP50607 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
TUBP50607 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TUBP50607 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TUBP50607 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TUBP50607 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TUBP50607 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TUBP50607 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TUBP50607 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TUBP50607 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TUBP50607 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TUBP50607 AC092127.1-201ENST00000567093 3455 ntBASIC16.28■□□□□ 0.2
TUBP50607 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.28■□□□□ 0.2
TUBP50607 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TUBP50607 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
TUBP50607 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.27■□□□□ 0.2
TUBP50607 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
TUBP50607 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TUBP50607 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms