Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 KLF2P3-201ENST00000451977 1087 ntBASIC16.92■□□□□ 0.3
USP8P40818 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.92■□□□□ 0.3
USP8P40818 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
USP8P40818 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.92■□□□□ 0.3
USP8P40818 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.92■□□□□ 0.3
USP8P40818 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
USP8P40818 SPDYE12P-201ENST00000618416 771 ntBASIC16.92■□□□□ 0.3
USP8P40818 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP8P40818 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC16.92■□□□□ 0.3
USP8P40818 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
USP8P40818 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.92■□□□□ 0.3
USP8P40818 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.92■□□□□ 0.3
USP8P40818 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
USP8P40818 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP8P40818 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.92■□□□□ 0.3
USP8P40818 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP8P40818 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
USP8P40818 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
USP8P40818 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
USP8P40818 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
USP8P40818 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.92■□□□□ 0.3
USP8P40818 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP8P40818 AC023908.3-201ENST00000564211 3047 ntBASIC16.91■□□□□ 0.3
USP8P40818 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP8P40818 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.91■□□□□ 0.3
USP8P40818 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP8P40818 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.91■□□□□ 0.3
USP8P40818 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
USP8P40818 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP8P40818 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP8P40818 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP8P40818 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.91■□□□□ 0.3
USP8P40818 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP8P40818 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.91■□□□□ 0.3
USP8P40818 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC16.91■□□□□ 0.3
USP8P40818 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
USP8P40818 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
USP8P40818 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
USP8P40818 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP8P40818 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP8P40818 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP8P40818 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.91■□□□□ 0.3
USP8P40818 TARDBPP1-201ENST00000442013 1203 ntBASIC16.91■□□□□ 0.3
USP8P40818 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.91■□□□□ 0.3
USP8P40818 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.91■□□□□ 0.3
USP8P40818 SERBP1P3-201ENST00000459980 809 ntBASIC16.91■□□□□ 0.3
USP8P40818 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.91■□□□□ 0.3
USP8P40818 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.91■□□□□ 0.3
USP8P40818 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.91■□□□□ 0.3
USP8P40818 AL138828.2-201ENST00000615812 383 ntBASIC16.91■□□□□ 0.3
USP8P40818 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.91■□□□□ 0.3
USP8P40818 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.91■□□□□ 0.3
USP8P40818 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP8P40818 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP8P40818 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP8P40818 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP8P40818 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
USP8P40818 AL109954.1-202ENST00000564051 2148 ntBASIC16.91■□□□□ 0.3
USP8P40818 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP8P40818 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP8P40818 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
USP8P40818 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
USP8P40818 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP8P40818 KRT18P28-201ENST00000453838 1332 ntBASIC16.91■□□□□ 0.3
USP8P40818 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
USP8P40818 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP8P40818 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
USP8P40818 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
USP8P40818 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
USP8P40818 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP8P40818 FO538757.1-201ENST00000623083 1397 ntBASIC16.9■□□□□ 0.3
USP8P40818 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.9■□□□□ 0.3
USP8P40818 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
USP8P40818 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
USP8P40818 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.9■□□□□ 0.3
USP8P40818 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP8P40818 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP8P40818 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP8P40818 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.9■□□□□ 0.3
USP8P40818 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP8P40818 PPP1R26P4-201ENST00000619065 3527 ntBASIC16.9■□□□□ 0.3
USP8P40818 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.9■□□□□ 0.3
USP8P40818 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.9■□□□□ 0.3
USP8P40818 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC16.9■□□□□ 0.3
USP8P40818 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP8P40818 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP8P40818 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP8P40818 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP8P40818 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.9■□□□□ 0.3
USP8P40818 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP8P40818 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP8P40818 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
USP8P40818 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP8P40818 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
USP8P40818 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.9■□□□□ 0.3
USP8P40818 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
USP8P40818 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.9■□□□□ 0.3
USP8P40818 AC107890.1-201ENST00000422478 521 ntBASIC16.9■□□□□ 0.3
USP8P40818 METTL21AP1-201ENST00000438852 635 ntBASIC16.9■□□□□ 0.3
USP8P40818 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms