Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC18.8■□□□□ 0.6
PDE6BP35913 AC073352.2-201ENST00000609385 439 ntBASIC18.8■□□□□ 0.6
PDE6BP35913 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC18.8■□□□□ 0.6
PDE6BP35913 AC103691.2-201ENST00000618824 433 ntBASIC18.8■□□□□ 0.6
PDE6BP35913 AC002472.3-201ENST00000640124 621 ntBASIC18.8■□□□□ 0.6
PDE6BP35913 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PDE6BP35913 AC022211.2-201ENST00000585075 2527 ntBASIC18.8■□□□□ 0.6
PDE6BP35913 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PDE6BP35913 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDE6BP35913 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDE6BP35913 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
PDE6BP35913 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
PDE6BP35913 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
PDE6BP35913 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDE6BP35913 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.8■□□□□ 0.6
PDE6BP35913 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PDE6BP35913 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.8■□□□□ 0.6
PDE6BP35913 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDE6BP35913 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDE6BP35913 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDE6BP35913 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDE6BP35913 ILF3-AS1-201ENST00000591501 1983 ntBASIC18.79■□□□□ 0.6
PDE6BP35913 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDE6BP35913 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDE6BP35913 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PDE6BP35913 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDE6BP35913 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDE6BP35913 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDE6BP35913 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDE6BP35913 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PDE6BP35913 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PDE6BP35913 RN7SKP175-201ENST00000408472 289 ntBASIC18.79■□□□□ 0.6
PDE6BP35913 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC18.79■□□□□ 0.6
PDE6BP35913 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC18.79■□□□□ 0.6
PDE6BP35913 AC098935.1-201ENST00000446057 611 ntBASIC18.79■□□□□ 0.6
PDE6BP35913 NOC2LP1-201ENST00000450578 752 ntBASIC18.79■□□□□ 0.6
PDE6BP35913 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
PDE6BP35913 RPL18P13-201ENST00000478088 569 ntBASIC18.79■□□□□ 0.6
PDE6BP35913 AC116345.2-201ENST00000512837 523 ntBASIC18.79■□□□□ 0.6
PDE6BP35913 IGLV3-15-201ENST00000518356 244 ntBASIC18.79■□□□□ 0.6
PDE6BP35913 AC090857.1-201ENST00000527400 390 ntBASIC18.79■□□□□ 0.6
PDE6BP35913 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDE6BP35913 AL132994.2-201ENST00000603120 687 ntBASIC18.79■□□□□ 0.6
PDE6BP35913 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC18.79■□□□□ 0.6
PDE6BP35913 COX6A1P2-201ENST00000620597 330 ntBASIC18.79■□□□□ 0.6
PDE6BP35913 AC011491.1-203ENST00000637688 543 ntBASIC18.79■□□□□ 0.6
PDE6BP35913 NAP1L6-202ENST00000641404 1222 ntBASIC18.79■□□□□ 0.6
PDE6BP35913 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDE6BP35913 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDE6BP35913 MTHFR-217ENST00000641820 1569 ntBASIC18.79■□□□□ 0.6
PDE6BP35913 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PDE6BP35913 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDE6BP35913 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDE6BP35913 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PDE6BP35913 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDE6BP35913 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDE6BP35913 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PDE6BP35913 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDE6BP35913 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.78■□□□□ 0.6
PDE6BP35913 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDE6BP35913 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDE6BP35913 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PDE6BP35913 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDE6BP35913 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.78■□□□□ 0.6
PDE6BP35913 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PDE6BP35913 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC18.78■□□□□ 0.6
PDE6BP35913 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDE6BP35913 SHC1P1-201ENST00000425230 1745 ntBASIC18.78■□□□□ 0.6
PDE6BP35913 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
PDE6BP35913 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC18.78■□□□□ 0.6
PDE6BP35913 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PDE6BP35913 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDE6BP35913 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC18.78■□□□□ 0.6
PDE6BP35913 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDE6BP35913 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PDE6BP35913 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC18.78■□□□□ 0.6
PDE6BP35913 HNRNPA1P41-201ENST00000397777 928 ntBASIC18.78■□□□□ 0.6
PDE6BP35913 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC18.78■□□□□ 0.6
PDE6BP35913 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC18.78■□□□□ 0.6
PDE6BP35913 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC18.78■□□□□ 0.6
PDE6BP35913 AC242376.1-201ENST00000559033 726 ntBASIC18.78■□□□□ 0.6
PDE6BP35913 DUX4L46-201ENST00000566845 751 ntBASIC18.78■□□□□ 0.6
PDE6BP35913 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PDE6BP35913 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDE6BP35913 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PDE6BP35913 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDE6BP35913 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PDE6BP35913 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PDE6BP35913 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.78■□□□□ 0.6
PDE6BP35913 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PDE6BP35913 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDE6BP35913 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PDE6BP35913 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.78■□□□□ 0.6
PDE6BP35913 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PDE6BP35913 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.78■□□□□ 0.6
PDE6BP35913 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDE6BP35913 CROCCP1-201ENST00000426910 5675 ntBASIC18.78■□□□□ 0.6
PDE6BP35913 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDE6BP35913 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDE6BP35913 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms