Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHMP24386 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CHMP24386 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.5□□□□□ -0.09
CHMP24386 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
CHMP24386 AL136982.4-201ENST00000437689 1740 ntBASIC14.5□□□□□ -0.09
CHMP24386 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CHMP24386 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHMP24386 FGD5P1-202ENST00000614866 2498 ntBASIC14.5□□□□□ -0.09
CHMP24386 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHMP24386 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.5□□□□□ -0.09
CHMP24386 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHMP24386 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHMP24386 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.5□□□□□ -0.09
CHMP24386 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.5□□□□□ -0.09
CHMP24386 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHMP24386 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHMP24386 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.5□□□□□ -0.09
CHMP24386 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.5□□□□□ -0.09
CHMP24386 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.5□□□□□ -0.09
CHMP24386 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.5□□□□□ -0.09
CHMP24386 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.5□□□□□ -0.09
CHMP24386 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.5□□□□□ -0.09
CHMP24386 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.5□□□□□ -0.09
CHMP24386 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHMP24386 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CHMP24386 REXO1L1P-202ENST00000608646 1974 ntBASIC14.5□□□□□ -0.09
CHMP24386 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHMP24386 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHMP24386 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CHMP24386 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.5□□□□□ -0.09
CHMP24386 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.5□□□□□ -0.09
CHMP24386 BNIP3P1-202ENST00000550043 1585 ntBASIC14.5□□□□□ -0.09
CHMP24386 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.5□□□□□ -0.09
CHMP24386 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
CHMP24386 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHMP24386 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.5□□□□□ -0.09
CHMP24386 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
CHMP24386 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHMP24386 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CHMP24386 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CHMP24386 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CHMP24386 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHMP24386 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHMP24386 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CHMP24386 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHMP24386 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHMP24386 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHMP24386 AC148477.4-201ENST00000613430 1793 ntBASIC14.5□□□□□ -0.09
CHMP24386 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHMP24386 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CHMP24386 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHMP24386 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CHMP24386 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHMP24386 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CHMP24386 AC023024.2-201ENST00000623561 1993 ntBASIC14.49□□□□□ -0.09
CHMP24386 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.49□□□□□ -0.09
CHMP24386 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHMP24386 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CHMP24386 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.49□□□□□ -0.09
CHMP24386 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHMP24386 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CHMP24386 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHMP24386 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHMP24386 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CHMP24386 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.49□□□□□ -0.09
CHMP24386 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHMP24386 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.49□□□□□ -0.09
CHMP24386 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CHMP24386 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CHMP24386 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.49□□□□□ -0.09
CHMP24386 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.49□□□□□ -0.09
CHMP24386 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.49□□□□□ -0.09
CHMP24386 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.49□□□□□ -0.09
CHMP24386 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CHMP24386 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.49□□□□□ -0.09
CHMP24386 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.49□□□□□ -0.09
CHMP24386 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.49□□□□□ -0.09
CHMP24386 TSPY16P-201ENST00000449843 468 ntBASIC14.49□□□□□ -0.09
CHMP24386 AC009477.1-201ENST00000452936 217 ntBASIC14.49□□□□□ -0.09
CHMP24386 RN7SL618P-201ENST00000477850 296 ntBASIC14.49□□□□□ -0.09
CHMP24386 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.49□□□□□ -0.09
CHMP24386 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.49□□□□□ -0.09
CHMP24386 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.49□□□□□ -0.09
CHMP24386 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CHMP24386 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CHMP24386 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.49□□□□□ -0.09
CHMP24386 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.49□□□□□ -0.09
CHMP24386 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CHMP24386 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CHMP24386 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.49□□□□□ -0.09
CHMP24386 AL844908.2-201ENST00000609461 460 ntBASIC14.49□□□□□ -0.09
CHMP24386 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.49□□□□□ -0.09
CHMP24386 AL033527.5-202ENST00000641632 1098 ntBASIC14.49□□□□□ -0.09
CHMP24386 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.49□□□□□ -0.09
CHMP24386 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CHMP24386 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
CHMP24386 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHMP24386 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHMP24386 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CHMP24386 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms