Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H2ABP04908 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H2ABP04908 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H2ABP04908 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.16□□□□□ -0.14
HIST1H2ABP04908 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H2ABP04908 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
HIST1H2ABP04908 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H2ABP04908 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
HIST1H2ABP04908 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H2ABP04908 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H2ABP04908 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.15□□□□□ -0.14
HIST1H2ABP04908 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
HIST1H2ABP04908 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H2ABP04908 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
HIST1H2ABP04908 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H2ABP04908 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.15□□□□□ -0.14
HIST1H2ABP04908 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
HIST1H2ABP04908 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H2ABP04908 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
HIST1H2ABP04908 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
HIST1H2ABP04908 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.15□□□□□ -0.14
HIST1H2ABP04908 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H2ABP04908 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.15□□□□□ -0.14
HIST1H2ABP04908 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.15□□□□□ -0.14
HIST1H2ABP04908 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H2ABP04908 KRT8P44-201ENST00000441609 1350 ntBASIC14.15□□□□□ -0.14
HIST1H2ABP04908 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H2ABP04908 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H2ABP04908 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
HIST1H2ABP04908 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H2ABP04908 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.15□□□□□ -0.14
HIST1H2ABP04908 HLA-J-203ENST00000494367 1087 ntBASIC14.15□□□□□ -0.14
HIST1H2ABP04908 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.15□□□□□ -0.14
HIST1H2ABP04908 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.15□□□□□ -0.14
HIST1H2ABP04908 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
HIST1H2ABP04908 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.15□□□□□ -0.14
HIST1H2ABP04908 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H2ABP04908 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H2ABP04908 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H2ABP04908 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H2ABP04908 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H2ABP04908 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H2ABP04908 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H2ABP04908 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H2ABP04908 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H2ABP04908 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
HIST1H2ABP04908 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.15□□□□□ -0.14
HIST1H2ABP04908 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H2ABP04908 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
HIST1H2ABP04908 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
HIST1H2ABP04908 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H2ABP04908 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.15□□□□□ -0.14
HIST1H2ABP04908 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.15□□□□□ -0.14
HIST1H2ABP04908 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.15□□□□□ -0.14
HIST1H2ABP04908 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H2ABP04908 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
HIST1H2ABP04908 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.15
HIST1H2ABP04908 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HIST1H2ABP04908 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.14□□□□□ -0.15
HIST1H2ABP04908 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST1H2ABP04908 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.14□□□□□ -0.15
HIST1H2ABP04908 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST1H2ABP04908 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST1H2ABP04908 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
HIST1H2ABP04908 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.14□□□□□ -0.15
HIST1H2ABP04908 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST1H2ABP04908 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.14□□□□□ -0.15
HIST1H2ABP04908 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
HIST1H2ABP04908 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.14□□□□□ -0.15
HIST1H2ABP04908 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST1H2ABP04908 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST1H2ABP04908 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.14□□□□□ -0.15
HIST1H2ABP04908 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
HIST1H2ABP04908 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.14□□□□□ -0.15
HIST1H2ABP04908 TSEN15P1-201ENST00000423257 515 ntBASIC14.14□□□□□ -0.15
HIST1H2ABP04908 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HIST1H2ABP04908 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST1H2ABP04908 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.14□□□□□ -0.15
HIST1H2ABP04908 DNAJB3-202ENST00000449667 1266 ntBASIC14.14□□□□□ -0.15
HIST1H2ABP04908 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.14□□□□□ -0.15
HIST1H2ABP04908 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST1H2ABP04908 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
HIST1H2ABP04908 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.14□□□□□ -0.15
HIST1H2ABP04908 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST1H2ABP04908 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.14□□□□□ -0.15
HIST1H2ABP04908 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.14□□□□□ -0.15
HIST1H2ABP04908 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.14□□□□□ -0.15
HIST1H2ABP04908 AL033527.5-202ENST00000641632 1098 ntBASIC14.14□□□□□ -0.15
HIST1H2ABP04908 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST1H2ABP04908 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.14□□□□□ -0.15
HIST1H2ABP04908 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.14□□□□□ -0.15
HIST1H2ABP04908 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
HIST1H2ABP04908 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.14□□□□□ -0.15
HIST1H2ABP04908 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
HIST1H2ABP04908 ST20-AS1-201ENST00000560255 4223 ntBASIC14.14□□□□□ -0.15
HIST1H2ABP04908 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.14□□□□□ -0.15
HIST1H2ABP04908 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.14□□□□□ -0.15
HIST1H2ABP04908 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HIST1H2ABP04908 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST1H2ABP04908 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms