Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC19.03■□□□□ 0.64
SMARCA5O60264 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SMARCA5O60264 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SMARCA5O60264 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCA5O60264 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC19.03■□□□□ 0.64
SMARCA5O60264 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC19.03■□□□□ 0.64
SMARCA5O60264 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC19.03■□□□□ 0.64
SMARCA5O60264 AC190387.1-201ENST00000551683 408 ntBASIC19.03■□□□□ 0.64
SMARCA5O60264 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC19.03■□□□□ 0.64
SMARCA5O60264 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC19.03■□□□□ 0.64
SMARCA5O60264 CTBP2P3-201ENST00000585629 1255 ntBASIC19.03■□□□□ 0.64
SMARCA5O60264 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC19.03■□□□□ 0.64
SMARCA5O60264 AC007431.3-201ENST00000623221 587 ntBASIC19.03■□□□□ 0.64
SMARCA5O60264 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC19.03■□□□□ 0.64
SMARCA5O60264 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCA5O60264 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCA5O60264 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCA5O60264 AMT-232ENST00000636199 1546 ntTSL 5 BASIC19.03■□□□□ 0.64
SMARCA5O60264 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCA5O60264 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCA5O60264 MARS-233ENST00000628866 2583 ntTSL 5 BASIC19.03■□□□□ 0.64
SMARCA5O60264 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCA5O60264 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCA5O60264 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCA5O60264 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC19.03■□□□□ 0.64
SMARCA5O60264 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCA5O60264 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCA5O60264 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SMARCA5O60264 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMARCA5O60264 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC19.02■□□□□ 0.64
SMARCA5O60264 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
SMARCA5O60264 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
SMARCA5O60264 ZBED1P1-201ENST00000502364 1930 ntBASIC19.02■□□□□ 0.64
SMARCA5O60264 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC19.02■□□□□ 0.64
SMARCA5O60264 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMARCA5O60264 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMARCA5O60264 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMARCA5O60264 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SMARCA5O60264 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SMARCA5O60264 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMARCA5O60264 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SMARCA5O60264 DFFBP1-201ENST00000433250 979 ntBASIC19.02■□□□□ 0.64
SMARCA5O60264 AC026410.3-201ENST00000514280 936 ntBASIC19.02■□□□□ 0.64
SMARCA5O60264 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC19.02■□□□□ 0.64
SMARCA5O60264 BRI3BPP1-201ENST00000594224 787 ntBASIC19.02■□□□□ 0.64
SMARCA5O60264 YTHDF3-AS1-201ENST00000603538 718 ntBASIC19.02■□□□□ 0.64
SMARCA5O60264 AC008494.3-201ENST00000606615 944 ntBASIC19.02■□□□□ 0.64
SMARCA5O60264 AC106881.1-201ENST00000605849 3329 ntBASIC19.02■□□□□ 0.64
SMARCA5O60264 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC19.02■□□□□ 0.64
SMARCA5O60264 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SMARCA5O60264 PCDHGB8P-201ENST00000502926 1973 ntBASIC19.02■□□□□ 0.64
SMARCA5O60264 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
SMARCA5O60264 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SMARCA5O60264 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SMARCA5O60264 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SMARCA5O60264 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC19.02■□□□□ 0.63
SMARCA5O60264 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SMARCA5O60264 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCA5O60264 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCA5O60264 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCA5O60264 ACE3P-201ENST00000423435 1973 ntBASIC19.01■□□□□ 0.63
SMARCA5O60264 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SMARCA5O60264 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCA5O60264 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
SMARCA5O60264 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCA5O60264 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCA5O60264 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCA5O60264 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCA5O60264 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC19.01■□□□□ 0.63
SMARCA5O60264 MYCLP2-201ENST00000449268 967 ntBASIC19.01■□□□□ 0.63
SMARCA5O60264 ELK1P1-201ENST00000485699 580 ntBASIC19.01■□□□□ 0.63
SMARCA5O60264 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC19.01■□□□□ 0.63
SMARCA5O60264 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCA5O60264 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC19.01■□□□□ 0.63
SMARCA5O60264 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC19.01■□□□□ 0.63
SMARCA5O60264 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC19.01■□□□□ 0.63
SMARCA5O60264 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC19.01■□□□□ 0.63
SMARCA5O60264 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC19.01■□□□□ 0.63
SMARCA5O60264 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC19.01■□□□□ 0.63
SMARCA5O60264 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC19.01■□□□□ 0.63
SMARCA5O60264 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
SMARCA5O60264 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCA5O60264 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
SMARCA5O60264 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCA5O60264 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC19.01■□□□□ 0.63
SMARCA5O60264 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SMARCA5O60264 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCA5O60264 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
SMARCA5O60264 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCA5O60264 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCA5O60264 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
SMARCA5O60264 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCA5O60264 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC19.01■□□□□ 0.63
SMARCA5O60264 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
SMARCA5O60264 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCA5O60264 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC19.01■□□□□ 0.63
SMARCA5O60264 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
SMARCA5O60264 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCA5O60264 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SMARCA5O60264 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms