Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
HMX3A6NHT5 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMX3A6NHT5 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMX3A6NHT5 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
HMX3A6NHT5 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMX3A6NHT5 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.48□□□□□ -0.25
HMX3A6NHT5 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMX3A6NHT5 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HMX3A6NHT5 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMX3A6NHT5 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMX3A6NHT5 CICP11-201ENST00000434745 2827 ntBASIC13.48□□□□□ -0.25
HMX3A6NHT5 AC127383.1-201ENST00000444697 1800 ntBASIC13.48□□□□□ -0.25
HMX3A6NHT5 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HMX3A6NHT5 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HMX3A6NHT5 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
HMX3A6NHT5 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HMX3A6NHT5 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMX3A6NHT5 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMX3A6NHT5 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HMX3A6NHT5 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.48□□□□□ -0.25
HMX3A6NHT5 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMX3A6NHT5 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC13.47□□□□□ -0.25
HMX3A6NHT5 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.47□□□□□ -0.25
HMX3A6NHT5 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.47□□□□□ -0.25
HMX3A6NHT5 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMX3A6NHT5 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
HMX3A6NHT5 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HMX3A6NHT5 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HMX3A6NHT5 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMX3A6NHT5 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HMX3A6NHT5 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMX3A6NHT5 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.47□□□□□ -0.25
HMX3A6NHT5 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
HMX3A6NHT5 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC13.47□□□□□ -0.25
HMX3A6NHT5 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMX3A6NHT5 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC13.47□□□□□ -0.25
HMX3A6NHT5 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC13.47□□□□□ -0.25
HMX3A6NHT5 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC13.47□□□□□ -0.25
HMX3A6NHT5 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
HMX3A6NHT5 SAPCD2P3-201ENST00000455031 850 ntBASIC13.47□□□□□ -0.25
HMX3A6NHT5 KRT18P56-201ENST00000507275 550 ntBASIC13.47□□□□□ -0.25
HMX3A6NHT5 AF238378.1-201ENST00000526806 358 ntBASIC13.47□□□□□ -0.25
HMX3A6NHT5 SDHD-206ENST00000528182 754 ntTSL 3 BASIC13.47□□□□□ -0.25
HMX3A6NHT5 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC13.47□□□□□ -0.25
HMX3A6NHT5 AC139887.3-201ENST00000568585 713 ntBASIC13.47□□□□□ -0.25
HMX3A6NHT5 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC13.47□□□□□ -0.25
HMX3A6NHT5 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC13.47□□□□□ -0.25
HMX3A6NHT5 TBCB-205ENST00000585746 875 ntTSL 3 BASIC13.47□□□□□ -0.25
HMX3A6NHT5 IFNL4P1-201ENST00000607083 540 ntBASIC13.47□□□□□ -0.25
HMX3A6NHT5 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
HMX3A6NHT5 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
HMX3A6NHT5 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC13.47□□□□□ -0.25
HMX3A6NHT5 AL589182.2-201ENST00000619332 1049 ntBASIC13.47□□□□□ -0.25
HMX3A6NHT5 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.47□□□□□ -0.25
HMX3A6NHT5 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMX3A6NHT5 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMX3A6NHT5 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
HMX3A6NHT5 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMX3A6NHT5 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
HMX3A6NHT5 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HMX3A6NHT5 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMX3A6NHT5 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.47□□□□□ -0.25
HMX3A6NHT5 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.47□□□□□ -0.25
HMX3A6NHT5 AMT-221ENST00000538581 2038 ntTSL 2 BASIC13.47□□□□□ -0.25
HMX3A6NHT5 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMX3A6NHT5 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMX3A6NHT5 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC13.47□□□□□ -0.25
HMX3A6NHT5 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.47□□□□□ -0.25
HMX3A6NHT5 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.47□□□□□ -0.25
HMX3A6NHT5 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HMX3A6NHT5 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.47□□□□□ -0.25
HMX3A6NHT5 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
HMX3A6NHT5 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.47□□□□□ -0.25
HMX3A6NHT5 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HMX3A6NHT5 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HMX3A6NHT5 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.47□□□□□ -0.25
HMX3A6NHT5 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.46□□□□□ -0.25
HMX3A6NHT5 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HMX3A6NHT5 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
HMX3A6NHT5 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.46□□□□□ -0.25
HMX3A6NHT5 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HMX3A6NHT5 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC13.46□□□□□ -0.25
HMX3A6NHT5 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
HMX3A6NHT5 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC13.46□□□□□ -0.25
HMX3A6NHT5 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
HMX3A6NHT5 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HMX3A6NHT5 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HMX3A6NHT5 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
HMX3A6NHT5 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.46□□□□□ -0.25
HMX3A6NHT5 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
HMX3A6NHT5 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HMX3A6NHT5 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HMX3A6NHT5 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
HMX3A6NHT5 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
HMX3A6NHT5 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
HMX3A6NHT5 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HMX3A6NHT5 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HMX3A6NHT5 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
HMX3A6NHT5 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.25
HMX3A6NHT5 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms