Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GFI1Q99684 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.33□□□□□ -0.28
GFI1Q99684 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.33□□□□□ -0.28
GFI1Q99684 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
GFI1Q99684 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GFI1Q99684 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GFI1Q99684 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GFI1Q99684 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GFI1Q99684 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GFI1Q99684 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GFI1Q99684 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GFI1Q99684 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GFI1Q99684 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GFI1Q99684 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.32□□□□□ -0.28
GFI1Q99684 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
GFI1Q99684 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
GFI1Q99684 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
GFI1Q99684 AC089987.1-201ENST00000551654 2209 ntBASIC13.32□□□□□ -0.28
GFI1Q99684 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.32□□□□□ -0.28
GFI1Q99684 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.32□□□□□ -0.28
GFI1Q99684 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.32□□□□□ -0.28
GFI1Q99684 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GFI1Q99684 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
GFI1Q99684 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GFI1Q99684 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
GFI1Q99684 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
GFI1Q99684 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
GFI1Q99684 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
GFI1Q99684 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GFI1Q99684 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GFI1Q99684 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GFI1Q99684 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
GFI1Q99684 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GFI1Q99684 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GFI1Q99684 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
GFI1Q99684 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GFI1Q99684 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
GFI1Q99684 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GFI1Q99684 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GFI1Q99684 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
GFI1Q99684 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
GFI1Q99684 RPL13AP23-201ENST00000480739 586 ntBASIC13.32□□□□□ -0.28
GFI1Q99684 AC069335.1-201ENST00000489972 472 ntBASIC13.32□□□□□ -0.28
GFI1Q99684 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GFI1Q99684 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC13.32□□□□□ -0.28
GFI1Q99684 AC105021.1-202ENST00000570572 669 ntBASIC13.32□□□□□ -0.28
GFI1Q99684 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC13.32□□□□□ -0.28
GFI1Q99684 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.32□□□□□ -0.28
GFI1Q99684 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GFI1Q99684 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
GFI1Q99684 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.32□□□□□ -0.28
GFI1Q99684 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GFI1Q99684 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GFI1Q99684 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GFI1Q99684 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
GFI1Q99684 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
GFI1Q99684 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GFI1Q99684 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
GFI1Q99684 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.32□□□□□ -0.28
GFI1Q99684 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GFI1Q99684 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GFI1Q99684 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GFI1Q99684 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GFI1Q99684 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
GFI1Q99684 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
GFI1Q99684 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GFI1Q99684 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.31□□□□□ -0.28
GFI1Q99684 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
GFI1Q99684 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GFI1Q99684 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
GFI1Q99684 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GFI1Q99684 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GFI1Q99684 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.31□□□□□ -0.28
GFI1Q99684 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.31□□□□□ -0.28
GFI1Q99684 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.31□□□□□ -0.28
GFI1Q99684 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
GFI1Q99684 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
GFI1Q99684 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GFI1Q99684 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
GFI1Q99684 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
GFI1Q99684 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.31□□□□□ -0.28
GFI1Q99684 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.31□□□□□ -0.28
GFI1Q99684 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.31□□□□□ -0.28
GFI1Q99684 AL662844.1-201ENST00000546340 181 ntBASIC13.31□□□□□ -0.28
GFI1Q99684 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
GFI1Q99684 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.31□□□□□ -0.28
GFI1Q99684 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.31□□□□□ -0.28
GFI1Q99684 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC13.31□□□□□ -0.28
GFI1Q99684 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.31□□□□□ -0.28
GFI1Q99684 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GFI1Q99684 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
GFI1Q99684 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
GFI1Q99684 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
GFI1Q99684 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.31□□□□□ -0.28
GFI1Q99684 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GFI1Q99684 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.31□□□□□ -0.28
GFI1Q99684 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
GFI1Q99684 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
GFI1Q99684 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GFI1Q99684 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms