Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV9Q99603 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV9Q99603 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV9Q99603 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC12.09□□□□□ -0.47
TRGV9Q99603 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV9Q99603 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.09□□□□□ -0.47
TRGV9Q99603 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV9Q99603 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV9Q99603 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV9Q99603 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
TRGV9Q99603 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC12.09□□□□□ -0.47
TRGV9Q99603 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC12.09□□□□□ -0.47
TRGV9Q99603 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV9Q99603 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
TRGV9Q99603 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV9Q99603 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV9Q99603 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV9Q99603 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC12.09□□□□□ -0.47
TRGV9Q99603 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV9Q99603 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC12.09□□□□□ -0.47
TRGV9Q99603 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
TRGV9Q99603 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
TRGV9Q99603 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
TRGV9Q99603 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC12.08□□□□□ -0.47
TRGV9Q99603 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
TRGV9Q99603 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
TRGV9Q99603 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.08□□□□□ -0.47
TRGV9Q99603 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
TRGV9Q99603 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC12.08□□□□□ -0.47
TRGV9Q99603 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
TRGV9Q99603 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
TRGV9Q99603 AP000845.1-201ENST00000581677 2131 ntBASIC12.08□□□□□ -0.47
TRGV9Q99603 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.08□□□□□ -0.47
TRGV9Q99603 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV9Q99603 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
TRGV9Q99603 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV9Q99603 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV9Q99603 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV9Q99603 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV9Q99603 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV9Q99603 MPI-203ENST00000535694 1523 ntTSL 2 BASIC12.08□□□□□ -0.48
TRGV9Q99603 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV9Q99603 AC140479.7-201ENST00000636301 2332 ntBASIC12.08□□□□□ -0.48
TRGV9Q99603 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC12.08□□□□□ -0.48
TRGV9Q99603 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV9Q99603 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV9Q99603 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
TRGV9Q99603 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV9Q99603 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC12.08□□□□□ -0.48
TRGV9Q99603 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC12.08□□□□□ -0.48
TRGV9Q99603 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC12.08□□□□□ -0.48
TRGV9Q99603 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
TRGV9Q99603 FAM58DP-201ENST00000428076 619 ntBASIC12.08□□□□□ -0.48
TRGV9Q99603 MTND6P24-201ENST00000440466 518 ntBASIC12.08□□□□□ -0.48
TRGV9Q99603 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC12.08□□□□□ -0.48
TRGV9Q99603 SERBP1P3-201ENST00000459980 809 ntBASIC12.08□□□□□ -0.48
TRGV9Q99603 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV9Q99603 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC12.08□□□□□ -0.48
TRGV9Q99603 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV9Q99603 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC12.08□□□□□ -0.48
TRGV9Q99603 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC12.08□□□□□ -0.48
TRGV9Q99603 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV9Q99603 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC12.08□□□□□ -0.48
TRGV9Q99603 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
TRGV9Q99603 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
TRGV9Q99603 AC005829.1-201ENST00000570002 483 ntBASIC12.08□□□□□ -0.48
TRGV9Q99603 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC12.08□□□□□ -0.48
TRGV9Q99603 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC12.08□□□□□ -0.48
TRGV9Q99603 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC12.08□□□□□ -0.48
TRGV9Q99603 UBL5-208ENST00000593087 320 ntTSL 3 BASIC12.08□□□□□ -0.48
TRGV9Q99603 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV9Q99603 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV9Q99603 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV9Q99603 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV9Q99603 COCH-203ENST00000460581 2688 ntTSL 2 BASIC12.08□□□□□ -0.48
TRGV9Q99603 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV9Q99603 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC12.08□□□□□ -0.48
TRGV9Q99603 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
TRGV9Q99603 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV9Q99603 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC12.08□□□□□ -0.48
TRGV9Q99603 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV9Q99603 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV9Q99603 Z97205.2-201ENST00000564697 1639 ntBASIC12.08□□□□□ -0.48
TRGV9Q99603 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV9Q99603 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC12.07□□□□□ -0.48
TRGV9Q99603 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC12.07□□□□□ -0.48
TRGV9Q99603 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV9Q99603 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
TRGV9Q99603 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV9Q99603 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV9Q99603 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV9Q99603 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV9Q99603 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC12.07□□□□□ -0.48
TRGV9Q99603 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC12.07□□□□□ -0.48
TRGV9Q99603 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV9Q99603 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
TRGV9Q99603 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV9Q99603 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV9Q99603 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV9Q99603 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms