Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAPGEF4Q8WZA2 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAPGEF4Q8WZA2 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAPGEF4Q8WZA2 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC20.04■□□□□ 0.8
RAPGEF4Q8WZA2 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAPGEF4Q8WZA2 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
RAPGEF4Q8WZA2 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RAPGEF4Q8WZA2 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAPGEF4Q8WZA2 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAPGEF4Q8WZA2 TUBBP5-203ENST00000508529 1334 ntBASIC20.03■□□□□ 0.8
RAPGEF4Q8WZA2 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC20.03■□□□□ 0.8
RAPGEF4Q8WZA2 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC20.03■□□□□ 0.8
RAPGEF4Q8WZA2 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAPGEF4Q8WZA2 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAPGEF4Q8WZA2 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAPGEF4Q8WZA2 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC20.03■□□□□ 0.8
RAPGEF4Q8WZA2 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RAPGEF4Q8WZA2 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
RAPGEF4Q8WZA2 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAPGEF4Q8WZA2 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RAPGEF4Q8WZA2 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC20.03■□□□□ 0.8
RAPGEF4Q8WZA2 AL133466.1-201ENST00000447582 150 ntBASIC20.03■□□□□ 0.8
RAPGEF4Q8WZA2 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC20.03■□□□□ 0.8
RAPGEF4Q8WZA2 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAPGEF4Q8WZA2 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAPGEF4Q8WZA2 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC20.03■□□□□ 0.8
RAPGEF4Q8WZA2 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC20.03■□□□□ 0.8
RAPGEF4Q8WZA2 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC20.03■□□□□ 0.8
RAPGEF4Q8WZA2 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC20.03■□□□□ 0.8
RAPGEF4Q8WZA2 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC20.03■□□□□ 0.8
RAPGEF4Q8WZA2 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC20.03■□□□□ 0.8
RAPGEF4Q8WZA2 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
RAPGEF4Q8WZA2 AC022748.3-201ENST00000621828 275 ntBASIC20.03■□□□□ 0.8
RAPGEF4Q8WZA2 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC20.03■□□□□ 0.8
RAPGEF4Q8WZA2 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RAPGEF4Q8WZA2 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC20.03■□□□□ 0.8
RAPGEF4Q8WZA2 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAPGEF4Q8WZA2 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RAPGEF4Q8WZA2 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
RAPGEF4Q8WZA2 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC20.03■□□□□ 0.8
RAPGEF4Q8WZA2 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAPGEF4Q8WZA2 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
RAPGEF4Q8WZA2 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
RAPGEF4Q8WZA2 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
RAPGEF4Q8WZA2 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RAPGEF4Q8WZA2 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAPGEF4Q8WZA2 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC20.03■□□□□ 0.8
RAPGEF4Q8WZA2 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
RAPGEF4Q8WZA2 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAPGEF4Q8WZA2 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
RAPGEF4Q8WZA2 AC010491.1-201ENST00000563101 2797 ntBASIC20.02■□□□□ 0.8
RAPGEF4Q8WZA2 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC20.02■□□□□ 0.8
RAPGEF4Q8WZA2 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
RAPGEF4Q8WZA2 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAPGEF4Q8WZA2 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RAPGEF4Q8WZA2 OVCH1-AS1-204ENST00000641955 5529 ntBASIC20.02■□□□□ 0.8
RAPGEF4Q8WZA2 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RAPGEF4Q8WZA2 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAPGEF4Q8WZA2 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
RAPGEF4Q8WZA2 CRCP-204ENST00000398684 492 ntTSL 2 BASIC20.02■□□□□ 0.8
RAPGEF4Q8WZA2 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAPGEF4Q8WZA2 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC20.02■□□□□ 0.8
RAPGEF4Q8WZA2 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC20.02■□□□□ 0.8
RAPGEF4Q8WZA2 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAPGEF4Q8WZA2 AC022217.1-201ENST00000521069 738 ntBASIC20.02■□□□□ 0.8
RAPGEF4Q8WZA2 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
RAPGEF4Q8WZA2 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAPGEF4Q8WZA2 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC20.02■□□□□ 0.8
RAPGEF4Q8WZA2 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC20.02■□□□□ 0.8
RAPGEF4Q8WZA2 AC091544.8-201ENST00000619490 361 ntBASIC20.02■□□□□ 0.8
RAPGEF4Q8WZA2 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAPGEF4Q8WZA2 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAPGEF4Q8WZA2 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
RAPGEF4Q8WZA2 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC20.02■□□□□ 0.8
RAPGEF4Q8WZA2 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RAPGEF4Q8WZA2 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAPGEF4Q8WZA2 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC20.02■□□□□ 0.8
RAPGEF4Q8WZA2 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAPGEF4Q8WZA2 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RAPGEF4Q8WZA2 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RAPGEF4Q8WZA2 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RAPGEF4Q8WZA2 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
RAPGEF4Q8WZA2 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RAPGEF4Q8WZA2 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC20.02■□□□□ 0.79
RAPGEF4Q8WZA2 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAPGEF4Q8WZA2 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
RAPGEF4Q8WZA2 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC20.01■□□□□ 0.79
RAPGEF4Q8WZA2 AC026471.1-201ENST00000564629 3026 ntBASIC20.01■□□□□ 0.79
RAPGEF4Q8WZA2 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAPGEF4Q8WZA2 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC20.01■□□□□ 0.79
RAPGEF4Q8WZA2 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAPGEF4Q8WZA2 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RAPGEF4Q8WZA2 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAPGEF4Q8WZA2 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAPGEF4Q8WZA2 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RAPGEF4Q8WZA2 RN7SL11P-201ENST00000471305 293 ntBASIC20.01■□□□□ 0.79
RAPGEF4Q8WZA2 RN7SL720P-201ENST00000488178 304 ntBASIC20.01■□□□□ 0.79
RAPGEF4Q8WZA2 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC20.01■□□□□ 0.79
RAPGEF4Q8WZA2 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC20.01■□□□□ 0.79
RAPGEF4Q8WZA2 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms