Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CDC42BPAQ5VT25 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
CDC42BPAQ5VT25 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC22.74■■□□□ 1.23
CDC42BPAQ5VT25 ZBED1P1-201ENST00000502364 1930 ntBASIC22.74■■□□□ 1.23
CDC42BPAQ5VT25 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
CDC42BPAQ5VT25 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC22.74■■□□□ 1.23
CDC42BPAQ5VT25 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC22.74■■□□□ 1.23
CDC42BPAQ5VT25 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CDC42BPAQ5VT25 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CDC42BPAQ5VT25 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
CDC42BPAQ5VT25 RNA5SP359-201ENST00000364838 113 ntBASIC22.74■■□□□ 1.23
CDC42BPAQ5VT25 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
CDC42BPAQ5VT25 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
CDC42BPAQ5VT25 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC22.74■■□□□ 1.23
CDC42BPAQ5VT25 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC22.74■■□□□ 1.23
CDC42BPAQ5VT25 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC22.74■■□□□ 1.23
CDC42BPAQ5VT25 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC22.74■■□□□ 1.23
CDC42BPAQ5VT25 AC026803.1-201ENST00000569130 274 ntBASIC22.74■■□□□ 1.23
CDC42BPAQ5VT25 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC22.74■■□□□ 1.23
CDC42BPAQ5VT25 AC008825.2-201ENST00000603374 718 ntBASIC22.74■■□□□ 1.23
CDC42BPAQ5VT25 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC22.74■■□□□ 1.23
CDC42BPAQ5VT25 AL805961.1-201ENST00000642026 753 ntBASIC22.74■■□□□ 1.23
CDC42BPAQ5VT25 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC22.73■■□□□ 1.23
CDC42BPAQ5VT25 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
CDC42BPAQ5VT25 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
CDC42BPAQ5VT25 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CDC42BPAQ5VT25 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
CDC42BPAQ5VT25 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
CDC42BPAQ5VT25 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CDC42BPAQ5VT25 STRN-202ENST00000379213 2254 ntTSL 5 BASIC22.73■■□□□ 1.23
CDC42BPAQ5VT25 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC22.73■■□□□ 1.23
CDC42BPAQ5VT25 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CDC42BPAQ5VT25 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CDC42BPAQ5VT25 PUDPP3-201ENST00000445368 636 ntBASIC22.73■■□□□ 1.23
CDC42BPAQ5VT25 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
CDC42BPAQ5VT25 TMCO5B-205ENST00000530020 894 ntBASIC22.73■■□□□ 1.23
CDC42BPAQ5VT25 NEU3-205ENST00000531619 582 ntTSL 5 BASIC22.73■■□□□ 1.23
CDC42BPAQ5VT25 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC22.73■■□□□ 1.23
CDC42BPAQ5VT25 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC22.73■■□□□ 1.23
CDC42BPAQ5VT25 AC242376.2-201ENST00000619355 883 ntBASIC22.73■■□□□ 1.23
CDC42BPAQ5VT25 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC22.73■■□□□ 1.23
CDC42BPAQ5VT25 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CDC42BPAQ5VT25 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC22.73■■□□□ 1.23
CDC42BPAQ5VT25 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CDC42BPAQ5VT25 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CDC42BPAQ5VT25 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CDC42BPAQ5VT25 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC22.72■■□□□ 1.23
CDC42BPAQ5VT25 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
CDC42BPAQ5VT25 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CDC42BPAQ5VT25 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC22.72■■□□□ 1.23
CDC42BPAQ5VT25 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
CDC42BPAQ5VT25 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC22.72■■□□□ 1.23
CDC42BPAQ5VT25 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CDC42BPAQ5VT25 BID-213ENST00000615414 2236 ntTSL 5 BASIC22.72■■□□□ 1.23
CDC42BPAQ5VT25 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC22.72■■□□□ 1.23
CDC42BPAQ5VT25 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CDC42BPAQ5VT25 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC22.72■■□□□ 1.23
CDC42BPAQ5VT25 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC22.72■■□□□ 1.23
CDC42BPAQ5VT25 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
CDC42BPAQ5VT25 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CDC42BPAQ5VT25 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CDC42BPAQ5VT25 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
CDC42BPAQ5VT25 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC22.72■■□□□ 1.23
CDC42BPAQ5VT25 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CDC42BPAQ5VT25 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CDC42BPAQ5VT25 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CDC42BPAQ5VT25 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC22.71■■□□□ 1.23
CDC42BPAQ5VT25 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC22.71■■□□□ 1.23
CDC42BPAQ5VT25 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC22.71■■□□□ 1.23
CDC42BPAQ5VT25 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
CDC42BPAQ5VT25 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC22.71■■□□□ 1.23
CDC42BPAQ5VT25 HPN-206ENST00000597419 1212 ntTSL 5 BASIC22.71■■□□□ 1.23
CDC42BPAQ5VT25 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
CDC42BPAQ5VT25 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
CDC42BPAQ5VT25 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC22.71■■□□□ 1.23
CDC42BPAQ5VT25 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC22.71■■□□□ 1.23
CDC42BPAQ5VT25 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC22.71■■□□□ 1.23
CDC42BPAQ5VT25 AL391005.1-201ENST00000623953 2435 ntBASIC22.71■■□□□ 1.23
CDC42BPAQ5VT25 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CDC42BPAQ5VT25 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CDC42BPAQ5VT25 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CDC42BPAQ5VT25 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
CDC42BPAQ5VT25 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC22.71■■□□□ 1.23
CDC42BPAQ5VT25 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC22.71■■□□□ 1.23
CDC42BPAQ5VT25 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
CDC42BPAQ5VT25 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CDC42BPAQ5VT25 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC22.71■■□□□ 1.23
CDC42BPAQ5VT25 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CDC42BPAQ5VT25 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CDC42BPAQ5VT25 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC22.71■■□□□ 1.23
CDC42BPAQ5VT25 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CDC42BPAQ5VT25 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC22.71■■□□□ 1.23
CDC42BPAQ5VT25 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC22.71■■□□□ 1.23
CDC42BPAQ5VT25 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC22.71■■□□□ 1.23
CDC42BPAQ5VT25 SOD2-202ENST00000367054 815 ntTSL 2 BASIC22.71■■□□□ 1.23
CDC42BPAQ5VT25 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CDC42BPAQ5VT25 AC078991.1-201ENST00000437297 610 ntBASIC22.71■■□□□ 1.23
CDC42BPAQ5VT25 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC22.71■■□□□ 1.23
CDC42BPAQ5VT25 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CDC42BPAQ5VT25 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms