Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
VPS13DQ5THJ4 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
VPS13DQ5THJ4 CYP4F23P-201ENST00000593402 1579 ntBASIC10.08□□□□□ -0.8
VPS13DQ5THJ4 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
VPS13DQ5THJ4 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
VPS13DQ5THJ4 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
VPS13DQ5THJ4 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
VPS13DQ5THJ4 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
VPS13DQ5THJ4 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC10.08□□□□□ -0.8
VPS13DQ5THJ4 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC10.08□□□□□ -0.8
VPS13DQ5THJ4 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC10.08□□□□□ -0.8
VPS13DQ5THJ4 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC10.08□□□□□ -0.8
VPS13DQ5THJ4 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
VPS13DQ5THJ4 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC10.08□□□□□ -0.8
VPS13DQ5THJ4 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC10.08□□□□□ -0.8
VPS13DQ5THJ4 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC10.08□□□□□ -0.8
VPS13DQ5THJ4 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
VPS13DQ5THJ4 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
VPS13DQ5THJ4 AL022344.2-201ENST00000568976 968 ntBASIC10.08□□□□□ -0.8
VPS13DQ5THJ4 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC10.08□□□□□ -0.8
VPS13DQ5THJ4 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
VPS13DQ5THJ4 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
VPS13DQ5THJ4 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
VPS13DQ5THJ4 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC10.08□□□□□ -0.8
VPS13DQ5THJ4 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
VPS13DQ5THJ4 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
VPS13DQ5THJ4 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
VPS13DQ5THJ4 KRT8P31-201ENST00000504812 1408 ntBASIC10.08□□□□□ -0.8
VPS13DQ5THJ4 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
VPS13DQ5THJ4 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC10.08□□□□□ -0.8
VPS13DQ5THJ4 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
VPS13DQ5THJ4 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
VPS13DQ5THJ4 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
VPS13DQ5THJ4 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC10.08□□□□□ -0.8
VPS13DQ5THJ4 AL157792.1-201ENST00000488281 530 ntBASIC10.08□□□□□ -0.8
VPS13DQ5THJ4 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
VPS13DQ5THJ4 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC10.08□□□□□ -0.8
VPS13DQ5THJ4 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
VPS13DQ5THJ4 MVK-214ENST00000629016 1591 ntTSL 5 BASIC10.08□□□□□ -0.8
VPS13DQ5THJ4 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
VPS13DQ5THJ4 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
VPS13DQ5THJ4 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
VPS13DQ5THJ4 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 AC079112.1-201ENST00000454972 939 ntBASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 MRPL22P1-201ENST00000505398 616 ntBASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 HKR1-225ENST00000592168 566 ntTSL 4 BASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 AC242376.2-201ENST00000619355 883 ntBASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 WARS-232ENST00000556645 2508 ntTSL 5 BASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 AC092850.2-201ENST00000623821 2697 ntBASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 NEU3-207ENST00000534628 746 ntTSL 2 BASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 AC006058.4-201ENST00000624016 1670 ntBASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
VPS13DQ5THJ4 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms