Protein–RNA interactions for Protein: Q3C1V8

BSX, Brain-specific homeobox protein homolog, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BSXQ3C1V8 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
BSXQ3C1V8 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
BSXQ3C1V8 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
BSXQ3C1V8 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC12.56□□□□□ -0.4
BSXQ3C1V8 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC12.56□□□□□ -0.4
BSXQ3C1V8 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.56□□□□□ -0.4
BSXQ3C1V8 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
BSXQ3C1V8 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BSXQ3C1V8 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
BSXQ3C1V8 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
BSXQ3C1V8 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.56□□□□□ -0.4
BSXQ3C1V8 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC12.56□□□□□ -0.4
BSXQ3C1V8 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
BSXQ3C1V8 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.56□□□□□ -0.4
BSXQ3C1V8 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
BSXQ3C1V8 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
BSXQ3C1V8 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BSXQ3C1V8 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BSXQ3C1V8 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC12.56□□□□□ -0.4
BSXQ3C1V8 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BSXQ3C1V8 HLA-H-201ENST00000383620 1096 ntBASIC12.56□□□□□ -0.4
BSXQ3C1V8 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
BSXQ3C1V8 TFAMP1-201ENST00000412727 736 ntBASIC12.56□□□□□ -0.4
BSXQ3C1V8 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC12.56□□□□□ -0.4
BSXQ3C1V8 AL671277.1-201ENST00000429656 993 ntBASIC12.56□□□□□ -0.4
BSXQ3C1V8 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC12.56□□□□□ -0.4
BSXQ3C1V8 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC12.56□□□□□ -0.4
BSXQ3C1V8 AL591424.1-201ENST00000442569 1213 ntBASIC12.56□□□□□ -0.4
BSXQ3C1V8 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
BSXQ3C1V8 AL139010.1-201ENST00000454878 894 ntBASIC12.56□□□□□ -0.4
BSXQ3C1V8 RNA5SP410-201ENST00000516285 106 ntBASIC12.56□□□□□ -0.4
BSXQ3C1V8 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC12.56□□□□□ -0.4
BSXQ3C1V8 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC12.56□□□□□ -0.4
BSXQ3C1V8 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC12.56□□□□□ -0.4
BSXQ3C1V8 SSH2-211ENST00000590153 570 ntTSL 4 BASIC12.56□□□□□ -0.4
BSXQ3C1V8 AC097359.3-201ENST00000603982 1210 ntBASIC12.56□□□□□ -0.4
BSXQ3C1V8 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC12.56□□□□□ -0.4
BSXQ3C1V8 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC12.56□□□□□ -0.4
BSXQ3C1V8 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
BSXQ3C1V8 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BSXQ3C1V8 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BSXQ3C1V8 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
BSXQ3C1V8 PID1-202ENST00000392054 2745 ntTSL 2 BASIC12.56□□□□□ -0.4
BSXQ3C1V8 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
BSXQ3C1V8 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
BSXQ3C1V8 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
BSXQ3C1V8 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC12.56□□□□□ -0.4
BSXQ3C1V8 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC12.56□□□□□ -0.4
BSXQ3C1V8 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BSXQ3C1V8 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.56□□□□□ -0.4
BSXQ3C1V8 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
BSXQ3C1V8 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BSXQ3C1V8 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
BSXQ3C1V8 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
BSXQ3C1V8 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BSXQ3C1V8 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
BSXQ3C1V8 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
BSXQ3C1V8 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BSXQ3C1V8 AC006504.5-208ENST00000588784 2401 ntBASIC12.56□□□□□ -0.4
BSXQ3C1V8 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BSXQ3C1V8 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
BSXQ3C1V8 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BSXQ3C1V8 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC12.55□□□□□ -0.4
BSXQ3C1V8 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BSXQ3C1V8 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BSXQ3C1V8 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BSXQ3C1V8 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
BSXQ3C1V8 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
BSXQ3C1V8 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
BSXQ3C1V8 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
BSXQ3C1V8 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC12.55□□□□□ -0.4
BSXQ3C1V8 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
BSXQ3C1V8 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
BSXQ3C1V8 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC12.55□□□□□ -0.4
BSXQ3C1V8 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BSXQ3C1V8 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BSXQ3C1V8 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC12.55□□□□□ -0.4
BSXQ3C1V8 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
BSXQ3C1V8 CELP-203ENST00000624767 2414 ntTSL 5 BASIC12.55□□□□□ -0.4
BSXQ3C1V8 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BSXQ3C1V8 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BSXQ3C1V8 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BSXQ3C1V8 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BSXQ3C1V8 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
BSXQ3C1V8 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BSXQ3C1V8 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
BSXQ3C1V8 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BSXQ3C1V8 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC12.55□□□□□ -0.4
BSXQ3C1V8 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC12.55□□□□□ -0.4
BSXQ3C1V8 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC12.55□□□□□ -0.4
BSXQ3C1V8 PP7080-204ENST00000510714 601 ntTSL 3 BASIC12.55□□□□□ -0.4
BSXQ3C1V8 RNA5SP416-201ENST00000516838 111 ntBASIC12.55□□□□□ -0.4
BSXQ3C1V8 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC12.55□□□□□ -0.4
BSXQ3C1V8 HNRNPUP1-201ENST00000554987 333 ntBASIC12.55□□□□□ -0.4
BSXQ3C1V8 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC12.55□□□□□ -0.4
BSXQ3C1V8 AP000842.3-202ENST00000569238 1080 ntBASIC12.55□□□□□ -0.4
BSXQ3C1V8 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
BSXQ3C1V8 AC091812.2-201ENST00000619081 385 ntBASIC12.55□□□□□ -0.4
BSXQ3C1V8 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
BSXQ3C1V8 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms