Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
LTBQ06643 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LTBQ06643 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LTBQ06643 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LTBQ06643 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LTBQ06643 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LTBQ06643 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LTBQ06643 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.16□□□□□ -0.14
LTBQ06643 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LTBQ06643 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LTBQ06643 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LTBQ06643 FAM45BP-202ENST00000592932 1624 ntBASIC14.16□□□□□ -0.14
LTBQ06643 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.16□□□□□ -0.14
LTBQ06643 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LTBQ06643 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
LTBQ06643 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LTBQ06643 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LTBQ06643 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LTBQ06643 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LTBQ06643 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.16□□□□□ -0.14
LTBQ06643 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LTBQ06643 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LTBQ06643 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
LTBQ06643 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.16□□□□□ -0.14
LTBQ06643 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.16□□□□□ -0.14
LTBQ06643 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LTBQ06643 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
LTBQ06643 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.16□□□□□ -0.14
LTBQ06643 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.16□□□□□ -0.14
LTBQ06643 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LTBQ06643 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.16□□□□□ -0.14
LTBQ06643 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LTBQ06643 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.16□□□□□ -0.14
LTBQ06643 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.16□□□□□ -0.14
LTBQ06643 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.16□□□□□ -0.14
LTBQ06643 AC017083.2-201ENST00000608069 979 ntBASIC14.16□□□□□ -0.14
LTBQ06643 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.16□□□□□ -0.14
LTBQ06643 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LTBQ06643 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LTBQ06643 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
LTBQ06643 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LTBQ06643 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
LTBQ06643 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.16□□□□□ -0.14
LTBQ06643 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
LTBQ06643 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LTBQ06643 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LTBQ06643 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LTBQ06643 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.16□□□□□ -0.14
LTBQ06643 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LTBQ06643 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LTBQ06643 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.16□□□□□ -0.14
LTBQ06643 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LTBQ06643 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
LTBQ06643 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LTBQ06643 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LTBQ06643 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
LTBQ06643 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.16□□□□□ -0.14
LTBQ06643 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LTBQ06643 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LTBQ06643 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LTBQ06643 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LTBQ06643 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LTBQ06643 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
LTBQ06643 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LTBQ06643 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.15□□□□□ -0.14
LTBQ06643 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LTBQ06643 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LTBQ06643 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LTBQ06643 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
LTBQ06643 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
LTBQ06643 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LTBQ06643 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LTBQ06643 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.15□□□□□ -0.14
LTBQ06643 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LTBQ06643 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LTBQ06643 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LTBQ06643 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
LTBQ06643 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.15□□□□□ -0.14
LTBQ06643 AC092580.3-201ENST00000430932 139 ntBASIC14.15□□□□□ -0.14
LTBQ06643 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.15□□□□□ -0.14
LTBQ06643 RPS2P32-201ENST00000439199 892 ntBASIC14.15□□□□□ -0.14
LTBQ06643 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LTBQ06643 PARP8-218ENST00000513738 596 ntTSL 4 BASIC14.15□□□□□ -0.14
LTBQ06643 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.15□□□□□ -0.14
LTBQ06643 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.15□□□□□ -0.14
LTBQ06643 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.15□□□□□ -0.14
LTBQ06643 AC010336.2-201ENST00000564226 506 ntBASIC14.15□□□□□ -0.14
LTBQ06643 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LTBQ06643 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LTBQ06643 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
LTBQ06643 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.15□□□□□ -0.14
LTBQ06643 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LTBQ06643 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LTBQ06643 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.15□□□□□ -0.14
LTBQ06643 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
LTBQ06643 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LTBQ06643 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.15□□□□□ -0.14
LTBQ06643 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LTBQ06643 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.15□□□□□ -0.14
LTBQ06643 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms