Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
WNT3AP56704 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
WNT3AP56704 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.62■□□□□ 0.09
WNT3AP56704 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
WNT3AP56704 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
WNT3AP56704 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
WNT3AP56704 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
WNT3AP56704 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
WNT3AP56704 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
WNT3AP56704 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
WNT3AP56704 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.62■□□□□ 0.09
WNT3AP56704 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
WNT3AP56704 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
WNT3AP56704 SLC7A15P-201ENST00000424028 1363 ntBASIC15.62■□□□□ 0.09
WNT3AP56704 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
WNT3AP56704 WASH3P-207ENST00000560956 1394 ntBASIC15.62■□□□□ 0.09
WNT3AP56704 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
WNT3AP56704 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
WNT3AP56704 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.61■□□□□ 0.09
WNT3AP56704 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
WNT3AP56704 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
WNT3AP56704 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
WNT3AP56704 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
WNT3AP56704 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
WNT3AP56704 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.61■□□□□ 0.09
WNT3AP56704 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.61■□□□□ 0.09
WNT3AP56704 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
WNT3AP56704 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.61■□□□□ 0.09
WNT3AP56704 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.61■□□□□ 0.09
WNT3AP56704 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
WNT3AP56704 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.61■□□□□ 0.09
WNT3AP56704 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.61■□□□□ 0.09
WNT3AP56704 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
WNT3AP56704 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
WNT3AP56704 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
WNT3AP56704 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
WNT3AP56704 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
WNT3AP56704 AC104457.1-201ENST00000401024 814 ntBASIC15.61■□□□□ 0.09
WNT3AP56704 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.61■□□□□ 0.09
WNT3AP56704 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.61■□□□□ 0.09
WNT3AP56704 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.61■□□□□ 0.09
WNT3AP56704 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.61■□□□□ 0.09
WNT3AP56704 GAPDHP40-201ENST00000505218 1006 ntBASIC15.61■□□□□ 0.09
WNT3AP56704 AC055876.2-201ENST00000531834 546 ntBASIC15.61■□□□□ 0.09
WNT3AP56704 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.61■□□□□ 0.09
WNT3AP56704 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
WNT3AP56704 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.61■□□□□ 0.09
WNT3AP56704 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
WNT3AP56704 RRP7BP-205ENST00000566851 833 ntBASIC15.61■□□□□ 0.09
WNT3AP56704 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.61■□□□□ 0.09
WNT3AP56704 AL662799.1-202ENST00000614205 422 ntBASIC15.61■□□□□ 0.09
WNT3AP56704 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
WNT3AP56704 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.61■□□□□ 0.09
WNT3AP56704 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.61■□□□□ 0.09
WNT3AP56704 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
WNT3AP56704 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
WNT3AP56704 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
WNT3AP56704 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.61■□□□□ 0.09
WNT3AP56704 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
WNT3AP56704 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
WNT3AP56704 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
WNT3AP56704 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
WNT3AP56704 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
WNT3AP56704 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
WNT3AP56704 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
WNT3AP56704 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
WNT3AP56704 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
WNT3AP56704 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.6■□□□□ 0.09
WNT3AP56704 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
WNT3AP56704 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
WNT3AP56704 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.6■□□□□ 0.09
WNT3AP56704 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
WNT3AP56704 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
WNT3AP56704 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
WNT3AP56704 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.6■□□□□ 0.09
WNT3AP56704 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
WNT3AP56704 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
WNT3AP56704 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
WNT3AP56704 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
WNT3AP56704 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
WNT3AP56704 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.6■□□□□ 0.09
WNT3AP56704 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.6■□□□□ 0.09
WNT3AP56704 FAM207CP-201ENST00000443486 507 ntBASIC15.6■□□□□ 0.09
WNT3AP56704 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.6■□□□□ 0.09
WNT3AP56704 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.6■□□□□ 0.09
WNT3AP56704 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.6■□□□□ 0.09
WNT3AP56704 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.6■□□□□ 0.09
WNT3AP56704 RN7SL204P-201ENST00000582831 262 ntBASIC15.6■□□□□ 0.09
WNT3AP56704 LINC02560-201ENST00000596379 459 ntBASIC15.6■□□□□ 0.09
WNT3AP56704 AL049840.4-201ENST00000602422 811 ntBASIC15.6■□□□□ 0.09
WNT3AP56704 AC099568.2-201ENST00000609194 695 ntBASIC15.6■□□□□ 0.09
WNT3AP56704 MIR8072-201ENST00000614241 80 ntBASIC15.6■□□□□ 0.09
WNT3AP56704 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
WNT3AP56704 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
WNT3AP56704 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
WNT3AP56704 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
WNT3AP56704 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
WNT3AP56704 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
WNT3AP56704 ZBED1P1-201ENST00000502364 1930 ntBASIC15.6■□□□□ 0.09
WNT3AP56704 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms