Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 BRWD1P1-201ENST00000401091 371 ntBASIC16.89■□□□□ 0.29
CLCN3P51790 MPV17-205ENST00000402310 906 ntTSL 5 BASIC16.89■□□□□ 0.29
CLCN3P51790 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLCN3P51790 MIR1202-201ENST00000408529 83 ntBASIC16.89■□□□□ 0.29
CLCN3P51790 EIF3FP3-201ENST00000434851 1086 ntBASIC16.89■□□□□ 0.29
CLCN3P51790 RPL13AP20-201ENST00000459725 609 ntBASIC16.89■□□□□ 0.29
CLCN3P51790 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.89■□□□□ 0.29
CLCN3P51790 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLCN3P51790 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.89■□□□□ 0.29
CLCN3P51790 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC16.89■□□□□ 0.29
CLCN3P51790 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLCN3P51790 HNRNPA1P48-202ENST00000565308 961 ntBASIC16.89■□□□□ 0.29
CLCN3P51790 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC16.89■□□□□ 0.29
CLCN3P51790 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.89■□□□□ 0.29
CLCN3P51790 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC16.89■□□□□ 0.29
CLCN3P51790 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC16.89■□□□□ 0.29
CLCN3P51790 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLCN3P51790 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLCN3P51790 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLCN3P51790 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
CLCN3P51790 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLCN3P51790 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLCN3P51790 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLCN3P51790 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLCN3P51790 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.89■□□□□ 0.29
CLCN3P51790 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
CLCN3P51790 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLCN3P51790 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
CLCN3P51790 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLCN3P51790 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN3P51790 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN3P51790 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN3P51790 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN3P51790 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN3P51790 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN3P51790 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CLCN3P51790 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN3P51790 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN3P51790 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.88■□□□□ 0.29
CLCN3P51790 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC16.88■□□□□ 0.29
CLCN3P51790 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.88■□□□□ 0.29
CLCN3P51790 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
CLCN3P51790 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN3P51790 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN3P51790 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN3P51790 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN3P51790 APOC3-202ENST00000375345 604 ntTSL 5 BASIC16.88■□□□□ 0.29
CLCN3P51790 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN3P51790 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN3P51790 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CLCN3P51790 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.88■□□□□ 0.29
CLCN3P51790 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN3P51790 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.88■□□□□ 0.29
CLCN3P51790 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN3P51790 AC023310.1-201ENST00000554836 735 ntBASIC16.88■□□□□ 0.29
CLCN3P51790 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC16.88■□□□□ 0.29
CLCN3P51790 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.88■□□□□ 0.29
CLCN3P51790 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC16.88■□□□□ 0.29
CLCN3P51790 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC16.88■□□□□ 0.29
CLCN3P51790 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN3P51790 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN3P51790 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN3P51790 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.88■□□□□ 0.29
CLCN3P51790 AHCYP2-201ENST00000430630 1300 ntBASIC16.88■□□□□ 0.29
CLCN3P51790 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN3P51790 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN3P51790 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CLCN3P51790 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN3P51790 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN3P51790 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN3P51790 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CLCN3P51790 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLCN3P51790 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLCN3P51790 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC16.87■□□□□ 0.29
CLCN3P51790 REXO1L5P-201ENST00000622260 2098 ntBASIC16.87■□□□□ 0.29
CLCN3P51790 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.87■□□□□ 0.29
CLCN3P51790 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCN3P51790 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCN3P51790 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CLCN3P51790 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCN3P51790 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLCN3P51790 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.87■□□□□ 0.29
CLCN3P51790 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CLCN3P51790 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
CLCN3P51790 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLCN3P51790 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCN3P51790 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.87■□□□□ 0.29
CLCN3P51790 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLCN3P51790 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC16.87■□□□□ 0.29
CLCN3P51790 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CLCN3P51790 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CLCN3P51790 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC16.87■□□□□ 0.29
CLCN3P51790 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.87■□□□□ 0.29
CLCN3P51790 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLCN3P51790 DUX4L45-201ENST00000566406 1057 ntBASIC16.87■□□□□ 0.29
CLCN3P51790 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC16.87■□□□□ 0.29
CLCN3P51790 MIR4525-201ENST00000580000 75 ntBASIC16.87■□□□□ 0.29
CLCN3P51790 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC16.87■□□□□ 0.29
CLCN3P51790 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCN3P51790 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms