Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A6P48664 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.25■□□□□ 0.03
SLC1A6P48664 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A6P48664 AC113367.3-201ENST00000508316 1912 ntBASIC15.25■□□□□ 0.03
SLC1A6P48664 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A6P48664 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC1A6P48664 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC1A6P48664 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A6P48664 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A6P48664 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A6P48664 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SLC1A6P48664 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
SLC1A6P48664 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A6P48664 SPDYE11-202ENST00000450699 704 ntBASIC15.25■□□□□ 0.03
SLC1A6P48664 IGHV3-62-201ENST00000520057 340 ntBASIC15.25■□□□□ 0.03
SLC1A6P48664 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
SLC1A6P48664 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC1A6P48664 SPDYE9P-201ENST00000570642 692 ntBASIC15.25■□□□□ 0.03
SLC1A6P48664 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.25■□□□□ 0.03
SLC1A6P48664 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC1A6P48664 SPDYE10P-202ENST00000612005 668 ntBASIC15.25■□□□□ 0.03
SLC1A6P48664 SPDYE8P-202ENST00000612377 668 ntBASIC15.25■□□□□ 0.03
SLC1A6P48664 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A6P48664 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A6P48664 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A6P48664 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC1A6P48664 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A6P48664 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A6P48664 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A6P48664 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC1A6P48664 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A6P48664 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A6P48664 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC1A6P48664 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A6P48664 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A6P48664 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SLC1A6P48664 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A6P48664 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A6P48664 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SLC1A6P48664 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A6P48664 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A6P48664 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A6P48664 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SLC1A6P48664 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
SLC1A6P48664 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
SLC1A6P48664 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A6P48664 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A6P48664 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC1A6P48664 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC1A6P48664 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A6P48664 RPL13AP23-201ENST00000480739 586 ntBASIC15.24■□□□□ 0.03
SLC1A6P48664 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC1A6P48664 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.24■□□□□ 0.03
SLC1A6P48664 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC1A6P48664 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.24■□□□□ 0.03
SLC1A6P48664 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.24■□□□□ 0.03
SLC1A6P48664 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
SLC1A6P48664 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A6P48664 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A6P48664 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.24■□□□□ 0.03
SLC1A6P48664 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.24■□□□□ 0.03
SLC1A6P48664 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A6P48664 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
SLC1A6P48664 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A6P48664 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A6P48664 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A6P48664 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A6P48664 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A6P48664 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A6P48664 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC1A6P48664 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
SLC1A6P48664 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
SLC1A6P48664 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A6P48664 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
SLC1A6P48664 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A6P48664 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A6P48664 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
SLC1A6P48664 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A6P48664 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A6P48664 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A6P48664 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
SLC1A6P48664 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A6P48664 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.24■□□□□ 0.03
SLC1A6P48664 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC1A6P48664 HSPA7-201ENST00000445535 1927 ntBASIC15.23■□□□□ 0.03
SLC1A6P48664 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC1A6P48664 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
SLC1A6P48664 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC1A6P48664 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SLC1A6P48664 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLC1A6P48664 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC1A6P48664 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC1A6P48664 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.23■□□□□ 0.03
SLC1A6P48664 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLC1A6P48664 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SLC1A6P48664 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
SLC1A6P48664 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC1A6P48664 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SLC1A6P48664 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC1A6P48664 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms