Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RPA3P35244 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RPA3P35244 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RPA3P35244 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RPA3P35244 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RPA3P35244 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RPA3P35244 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RPA3P35244 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
RPA3P35244 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
RPA3P35244 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RPA3P35244 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
RPA3P35244 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.69■□□□□ 0.1
RPA3P35244 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RPA3P35244 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.69■□□□□ 0.1
RPA3P35244 OR2I1P-210ENST00000642037 4691 ntBASIC15.69■□□□□ 0.1
RPA3P35244 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.69■□□□□ 0.1
RPA3P35244 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RPA3P35244 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RPA3P35244 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RPA3P35244 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RPA3P35244 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.69■□□□□ 0.1
RPA3P35244 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPA3P35244 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.68■□□□□ 0.1
RPA3P35244 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPA3P35244 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.68■□□□□ 0.1
RPA3P35244 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RPA3P35244 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RPA3P35244 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.68■□□□□ 0.1
RPA3P35244 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.68■□□□□ 0.1
RPA3P35244 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPA3P35244 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPA3P35244 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RPA3P35244 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPA3P35244 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
RPA3P35244 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPA3P35244 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RPA3P35244 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RPA3P35244 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPA3P35244 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPA3P35244 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RPA3P35244 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RPA3P35244 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPA3P35244 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RPA3P35244 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RPA3P35244 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPA3P35244 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPA3P35244 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.68■□□□□ 0.1
RPA3P35244 FAM8A3P-201ENST00000427218 844 ntBASIC15.68■□□□□ 0.1
RPA3P35244 AL353705.2-201ENST00000428243 662 ntBASIC15.68■□□□□ 0.1
RPA3P35244 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.68■□□□□ 0.1
RPA3P35244 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.68■□□□□ 0.1
RPA3P35244 SPDYE14P-201ENST00000442619 822 ntBASIC15.68■□□□□ 0.1
RPA3P35244 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.68■□□□□ 0.1
RPA3P35244 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RPA3P35244 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.68■□□□□ 0.1
RPA3P35244 AC003101.2-201ENST00000612557 442 ntBASIC15.68■□□□□ 0.1
RPA3P35244 MIR6080-201ENST00000617359 66 ntBASIC15.68■□□□□ 0.1
RPA3P35244 AP001059.3-201ENST00000619053 235 ntBASIC15.68■□□□□ 0.1
RPA3P35244 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.68■□□□□ 0.1
RPA3P35244 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RPA3P35244 CICP11-201ENST00000434745 2827 ntBASIC15.68■□□□□ 0.1
RPA3P35244 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPA3P35244 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.68■□□□□ 0.1
RPA3P35244 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.68■□□□□ 0.1
RPA3P35244 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPA3P35244 INTS4P1-203ENST00000641008 3683 ntBASIC15.68■□□□□ 0.1
RPA3P35244 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPA3P35244 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPA3P35244 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPA3P35244 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RPA3P35244 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPA3P35244 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.68■□□□□ 0.1
RPA3P35244 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPA3P35244 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.67■□□□□ 0.1
RPA3P35244 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPA3P35244 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPA3P35244 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.67■□□□□ 0.1
RPA3P35244 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPA3P35244 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPA3P35244 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPA3P35244 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPA3P35244 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.67■□□□□ 0.1
RPA3P35244 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.67■□□□□ 0.1
RPA3P35244 WASH3P-207ENST00000560956 1394 ntBASIC15.67■□□□□ 0.1
RPA3P35244 FO538757.1-201ENST00000623083 1397 ntBASIC15.67■□□□□ 0.1
RPA3P35244 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RPA3P35244 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPA3P35244 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPA3P35244 SPDYE7P-202ENST00000420373 878 ntBASIC15.67■□□□□ 0.1
RPA3P35244 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.67■□□□□ 0.1
RPA3P35244 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.67■□□□□ 0.1
RPA3P35244 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.67■□□□□ 0.1
RPA3P35244 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.67■□□□□ 0.1
RPA3P35244 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.67■□□□□ 0.1
RPA3P35244 AC097359.3-201ENST00000603982 1210 ntBASIC15.67■□□□□ 0.1
RPA3P35244 AC018529.1-201ENST00000613063 361 ntBASIC15.67■□□□□ 0.1
RPA3P35244 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.67■□□□□ 0.1
RPA3P35244 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPA3P35244 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPA3P35244 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms