Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.16□□□□□ -0.3
HIST1H1DP16402 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H1DP16402 RARRES2P9-201ENST00000565168 469 ntBASIC13.16□□□□□ -0.3
HIST1H1DP16402 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H1DP16402 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H1DP16402 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.16□□□□□ -0.3
HIST1H1DP16402 AC026120.1-201ENST00000611536 926 ntBASIC13.16□□□□□ -0.3
HIST1H1DP16402 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.16□□□□□ -0.3
HIST1H1DP16402 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H1DP16402 AC092902.6-201ENST00000641783 218 ntBASIC13.16□□□□□ -0.3
HIST1H1DP16402 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H1DP16402 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H1DP16402 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.16□□□□□ -0.3
HIST1H1DP16402 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.16□□□□□ -0.3
HIST1H1DP16402 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.16□□□□□ -0.3
HIST1H1DP16402 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
HIST1H1DP16402 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H1DP16402 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H1DP16402 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.16□□□□□ -0.3
HIST1H1DP16402 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H1DP16402 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.16□□□□□ -0.3
HIST1H1DP16402 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.16□□□□□ -0.3
HIST1H1DP16402 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.16□□□□□ -0.3
HIST1H1DP16402 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
HIST1H1DP16402 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.15□□□□□ -0.3
HIST1H1DP16402 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H1DP16402 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H1DP16402 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H1DP16402 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H1DP16402 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H1DP16402 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.15□□□□□ -0.3
HIST1H1DP16402 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H1DP16402 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H1DP16402 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
HIST1H1DP16402 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H1DP16402 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.15□□□□□ -0.3
HIST1H1DP16402 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H1DP16402 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H1DP16402 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.15□□□□□ -0.3
HIST1H1DP16402 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H1DP16402 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
HIST1H1DP16402 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H1DP16402 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H1DP16402 FO393414.2-201ENST00000405153 598 ntBASIC13.15□□□□□ -0.3
HIST1H1DP16402 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H1DP16402 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H1DP16402 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.15□□□□□ -0.3
HIST1H1DP16402 KRT8P48-201ENST00000515599 1220 ntBASIC13.15□□□□□ -0.3
HIST1H1DP16402 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC13.15□□□□□ -0.3
HIST1H1DP16402 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H1DP16402 RPL18-209ENST00000550645 463 ntTSL 5 BASIC13.15□□□□□ -0.3
HIST1H1DP16402 RPL18-214ENST00000552588 559 ntTSL 3 BASIC13.15□□□□□ -0.3
HIST1H1DP16402 AC106730.1-201ENST00000566722 1090 ntBASIC13.15□□□□□ -0.3
HIST1H1DP16402 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.15□□□□□ -0.3
HIST1H1DP16402 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
HIST1H1DP16402 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
HIST1H1DP16402 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
HIST1H1DP16402 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.15□□□□□ -0.3
HIST1H1DP16402 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H1DP16402 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H1DP16402 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
HIST1H1DP16402 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.15□□□□□ -0.3
HIST1H1DP16402 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H1DP16402 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
HIST1H1DP16402 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H1DP16402 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H1DP16402 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H1DP16402 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.15□□□□□ -0.3
HIST1H1DP16402 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
HIST1H1DP16402 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H1DP16402 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
HIST1H1DP16402 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.15□□□□□ -0.31
HIST1H1DP16402 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
HIST1H1DP16402 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
HIST1H1DP16402 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H1DP16402 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.14□□□□□ -0.31
HIST1H1DP16402 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H1DP16402 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H1DP16402 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
HIST1H1DP16402 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H1DP16402 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.14□□□□□ -0.31
HIST1H1DP16402 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.14□□□□□ -0.31
HIST1H1DP16402 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H1DP16402 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H1DP16402 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
HIST1H1DP16402 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H1DP16402 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.14□□□□□ -0.31
HIST1H1DP16402 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.14□□□□□ -0.31
HIST1H1DP16402 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.14□□□□□ -0.31
HIST1H1DP16402 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
HIST1H1DP16402 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H1DP16402 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.14□□□□□ -0.31
HIST1H1DP16402 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H1DP16402 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
HIST1H1DP16402 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H1DP16402 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.14□□□□□ -0.31
HIST1H1DP16402 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
HIST1H1DP16402 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H1DP16402 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H1DP16402 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms