Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
THRAP10827 AC026748.1-201ENST00000624349 3251 ntBASIC15.6■□□□□ 0.09
THRAP10827 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
THRAP10827 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
THRAP10827 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
THRAP10827 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
THRAP10827 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
THRAP10827 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
THRAP10827 AC112693.3-201ENST00000624819 1983 ntBASIC15.6■□□□□ 0.09
THRAP10827 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
THRAP10827 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
THRAP10827 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
THRAP10827 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
THRAP10827 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.59■□□□□ 0.09
THRAP10827 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.59■□□□□ 0.09
THRAP10827 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
THRAP10827 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.59■□□□□ 0.09
THRAP10827 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
THRAP10827 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
THRAP10827 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.59■□□□□ 0.09
THRAP10827 AC005089.1-201ENST00000619486 2241 ntBASIC15.59■□□□□ 0.09
THRAP10827 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
THRAP10827 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
THRAP10827 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.59■□□□□ 0.09
THRAP10827 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
THRAP10827 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
THRAP10827 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.59■□□□□ 0.09
THRAP10827 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
THRAP10827 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
THRAP10827 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
THRAP10827 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
THRAP10827 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.59■□□□□ 0.09
THRAP10827 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.59■□□□□ 0.09
THRAP10827 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.59■□□□□ 0.09
THRAP10827 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
THRAP10827 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.59■□□□□ 0.09
THRAP10827 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.59■□□□□ 0.09
THRAP10827 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.59■□□□□ 0.09
THRAP10827 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
THRAP10827 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
THRAP10827 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
THRAP10827 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
THRAP10827 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
THRAP10827 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.59■□□□□ 0.09
THRAP10827 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
THRAP10827 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
THRAP10827 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
THRAP10827 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.59■□□□□ 0.09
THRAP10827 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
THRAP10827 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.59■□□□□ 0.09
THRAP10827 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.58■□□□□ 0.09
THRAP10827 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
THRAP10827 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
THRAP10827 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.58■□□□□ 0.09
THRAP10827 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
THRAP10827 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.58■□□□□ 0.09
THRAP10827 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.58■□□□□ 0.09
THRAP10827 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
THRAP10827 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
THRAP10827 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
THRAP10827 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
THRAP10827 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.58■□□□□ 0.09
THRAP10827 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
THRAP10827 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
THRAP10827 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.58■□□□□ 0.08
THRAP10827 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
THRAP10827 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
THRAP10827 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
THRAP10827 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
THRAP10827 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
THRAP10827 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.58■□□□□ 0.08
THRAP10827 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.58■□□□□ 0.08
THRAP10827 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
THRAP10827 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
THRAP10827 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
THRAP10827 SPDYE17-201ENST00000412399 783 ntBASIC15.58■□□□□ 0.08
THRAP10827 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
THRAP10827 COX5BP8-201ENST00000416911 349 ntBASIC15.58■□□□□ 0.08
THRAP10827 NME2P1-201ENST00000426182 414 ntBASIC15.58■□□□□ 0.08
THRAP10827 AC245100.5-201ENST00000452108 331 ntBASIC15.58■□□□□ 0.08
THRAP10827 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
THRAP10827 AC104794.3-201ENST00000566840 1248 ntBASIC15.58■□□□□ 0.08
THRAP10827 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.58■□□□□ 0.08
THRAP10827 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.58■□□□□ 0.08
THRAP10827 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.58■□□□□ 0.08
THRAP10827 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
THRAP10827 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
THRAP10827 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
THRAP10827 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.58■□□□□ 0.08
THRAP10827 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
THRAP10827 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.58■□□□□ 0.08
THRAP10827 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
THRAP10827 KRT8P12-202ENST00000472924 1397 ntBASIC15.58■□□□□ 0.08
THRAP10827 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.58■□□□□ 0.08
THRAP10827 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
THRAP10827 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
THRAP10827 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
THRAP10827 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.58■□□□□ 0.08
THRAP10827 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.58■□□□□ 0.08
THRAP10827 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms