Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TUBB4AP04350 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TUBB4AP04350 HADH-202ENST00000403312 1752 ntTSL 5 BASIC16.61■□□□□ 0.25
TUBB4AP04350 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBB4AP04350 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBB4AP04350 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBB4AP04350 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBB4AP04350 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TUBB4AP04350 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TUBB4AP04350 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBB4AP04350 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TUBB4AP04350 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TUBB4AP04350 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.61■□□□□ 0.25
TUBB4AP04350 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TUBB4AP04350 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBB4AP04350 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.61■□□□□ 0.25
TUBB4AP04350 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
TUBB4AP04350 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.61■□□□□ 0.25
TUBB4AP04350 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.61■□□□□ 0.25
TUBB4AP04350 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TUBB4AP04350 AC073389.1-201ENST00000595595 795 ntBASIC16.61■□□□□ 0.25
TUBB4AP04350 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.61■□□□□ 0.25
TUBB4AP04350 AC004790.2-201ENST00000623588 572 ntBASIC16.61■□□□□ 0.25
TUBB4AP04350 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TUBB4AP04350 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
TUBB4AP04350 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TUBB4AP04350 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBB4AP04350 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBB4AP04350 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBB4AP04350 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.61■□□□□ 0.25
TUBB4AP04350 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
TUBB4AP04350 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TUBB4AP04350 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBB4AP04350 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC16.61■□□□□ 0.25
TUBB4AP04350 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBB4AP04350 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBB4AP04350 DKFZP434A062-201ENST00000573103 5021 ntBASIC16.61■□□□□ 0.25
TUBB4AP04350 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBB4AP04350 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBB4AP04350 KRT8P22-201ENST00000562317 1415 ntBASIC16.61■□□□□ 0.25
TUBB4AP04350 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBB4AP04350 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBB4AP04350 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC16.61■□□□□ 0.25
TUBB4AP04350 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TUBB4AP04350 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.61■□□□□ 0.25
TUBB4AP04350 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TUBB4AP04350 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBB4AP04350 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC16.6■□□□□ 0.25
TUBB4AP04350 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
TUBB4AP04350 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC16.6■□□□□ 0.25
TUBB4AP04350 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBB4AP04350 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBB4AP04350 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC16.6■□□□□ 0.25
TUBB4AP04350 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBB4AP04350 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TUBB4AP04350 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBB4AP04350 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TUBB4AP04350 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBB4AP04350 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TUBB4AP04350 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBB4AP04350 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBB4AP04350 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.6■□□□□ 0.25
TUBB4AP04350 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
TUBB4AP04350 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.6■□□□□ 0.25
TUBB4AP04350 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.6■□□□□ 0.25
TUBB4AP04350 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.6■□□□□ 0.25
TUBB4AP04350 AL121772.3-201ENST00000610840 674 ntBASIC16.6■□□□□ 0.25
TUBB4AP04350 SPTSSB-204ENST00000617024 1292 ntBASIC16.6■□□□□ 0.25
TUBB4AP04350 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
TUBB4AP04350 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
TUBB4AP04350 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TUBB4AP04350 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TUBB4AP04350 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBB4AP04350 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBB4AP04350 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBB4AP04350 AL591122.2-201ENST00000624125 1853 ntBASIC16.6■□□□□ 0.25
TUBB4AP04350 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBB4AP04350 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TUBB4AP04350 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBB4AP04350 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TUBB4AP04350 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC16.6■□□□□ 0.25
TUBB4AP04350 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC16.6■□□□□ 0.25
TUBB4AP04350 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBB4AP04350 SRC-202ENST00000373558 4304 ntTSL 5 BASIC16.6■□□□□ 0.25
TUBB4AP04350 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC16.6■□□□□ 0.25
TUBB4AP04350 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBB4AP04350 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBB4AP04350 KRT8P24-201ENST00000560290 1559 ntBASIC16.6■□□□□ 0.25
TUBB4AP04350 AL136982.4-201ENST00000437689 1740 ntBASIC16.59■□□□□ 0.25
TUBB4AP04350 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TUBB4AP04350 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TUBB4AP04350 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TUBB4AP04350 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC16.59■□□□□ 0.25
TUBB4AP04350 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TUBB4AP04350 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TUBB4AP04350 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC16.59■□□□□ 0.25
TUBB4AP04350 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TUBB4AP04350 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TUBB4AP04350 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TUBB4AP04350 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms