Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
IFNA1P01562 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
IFNA1P01562 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC12.3□□□□□ -0.44
IFNA1P01562 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC12.3□□□□□ -0.44
IFNA1P01562 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
IFNA1P01562 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
IFNA1P01562 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
IFNA1P01562 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
IFNA1P01562 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC12.3□□□□□ -0.44
IFNA1P01562 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC12.3□□□□□ -0.44
IFNA1P01562 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC12.3□□□□□ -0.44
IFNA1P01562 AC010203.1-204ENST00000548782 407 ntBASIC12.3□□□□□ -0.44
IFNA1P01562 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
IFNA1P01562 MIR4313-201ENST00000580760 101 ntBASIC12.3□□□□□ -0.44
IFNA1P01562 MIR4497-201ENST00000583208 89 ntBASIC12.3□□□□□ -0.44
IFNA1P01562 AC145285.6-201ENST00000604632 637 ntBASIC12.3□□□□□ -0.44
IFNA1P01562 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
IFNA1P01562 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
IFNA1P01562 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
IFNA1P01562 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.3□□□□□ -0.44
IFNA1P01562 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
IFNA1P01562 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
IFNA1P01562 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
IFNA1P01562 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
IFNA1P01562 PCDHGB8P-201ENST00000502926 1973 ntBASIC12.3□□□□□ -0.44
IFNA1P01562 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
IFNA1P01562 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC12.3□□□□□ -0.44
IFNA1P01562 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
IFNA1P01562 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
IFNA1P01562 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
IFNA1P01562 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
IFNA1P01562 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC12.3□□□□□ -0.44
IFNA1P01562 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
IFNA1P01562 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.3□□□□□ -0.44
IFNA1P01562 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
IFNA1P01562 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC12.3□□□□□ -0.44
IFNA1P01562 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.3□□□□□ -0.44
IFNA1P01562 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
IFNA1P01562 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
IFNA1P01562 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
IFNA1P01562 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
IFNA1P01562 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
IFNA1P01562 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC12.3□□□□□ -0.44
IFNA1P01562 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
IFNA1P01562 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
IFNA1P01562 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
IFNA1P01562 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.3□□□□□ -0.44
IFNA1P01562 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC12.3□□□□□ -0.44
IFNA1P01562 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
IFNA1P01562 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA1P01562 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA1P01562 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
IFNA1P01562 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
IFNA1P01562 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC12.29□□□□□ -0.44
IFNA1P01562 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
IFNA1P01562 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA1P01562 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC12.29□□□□□ -0.44
IFNA1P01562 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.29□□□□□ -0.44
IFNA1P01562 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA1P01562 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
IFNA1P01562 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA1P01562 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA1P01562 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA1P01562 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA1P01562 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA1P01562 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC12.29□□□□□ -0.44
IFNA1P01562 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA1P01562 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
IFNA1P01562 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA1P01562 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA1P01562 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA1P01562 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA1P01562 PTCHD3P3-201ENST00000403073 906 ntBASIC12.29□□□□□ -0.44
IFNA1P01562 POM121L3P-201ENST00000419331 1163 ntBASIC12.29□□□□□ -0.44
IFNA1P01562 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC12.29□□□□□ -0.44
IFNA1P01562 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC12.29□□□□□ -0.44
IFNA1P01562 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC12.29□□□□□ -0.44
IFNA1P01562 CDV3-207ENST00000508481 661 ntTSL 3 BASIC12.29□□□□□ -0.44
IFNA1P01562 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC12.29□□□□□ -0.44
IFNA1P01562 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC12.29□□□□□ -0.44
IFNA1P01562 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC12.29□□□□□ -0.44
IFNA1P01562 AC139887.3-201ENST00000568585 713 ntBASIC12.29□□□□□ -0.44
IFNA1P01562 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC12.29□□□□□ -0.44
IFNA1P01562 NTF6B-201ENST00000591913 560 ntBASIC12.29□□□□□ -0.44
IFNA1P01562 AC011467.4-201ENST00000594891 528 ntBASIC12.29□□□□□ -0.44
IFNA1P01562 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC12.29□□□□□ -0.44
IFNA1P01562 AC097493.4-201ENST00000641197 219 ntBASIC12.29□□□□□ -0.44
IFNA1P01562 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA1P01562 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA1P01562 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA1P01562 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA1P01562 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA1P01562 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC12.29□□□□□ -0.44
IFNA1P01562 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
IFNA1P01562 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA1P01562 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA1P01562 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA1P01562 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA1P01562 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA1P01562 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms