Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.03□□□□□ -0.32
ABCA1O95477 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.03□□□□□ -0.32
ABCA1O95477 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC13.03□□□□□ -0.32
ABCA1O95477 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ABCA1O95477 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ABCA1O95477 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ABCA1O95477 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ABCA1O95477 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.03□□□□□ -0.32
ABCA1O95477 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ABCA1O95477 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ABCA1O95477 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC13.03□□□□□ -0.32
ABCA1O95477 AC104306.2-201ENST00000451877 341 ntBASIC13.03□□□□□ -0.32
ABCA1O95477 VDAC1P7-201ENST00000462417 847 ntBASIC13.03□□□□□ -0.32
ABCA1O95477 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
ABCA1O95477 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC13.03□□□□□ -0.32
ABCA1O95477 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC13.03□□□□□ -0.32
ABCA1O95477 COG4-212ENST00000564653 590 ntTSL 5 BASIC13.03□□□□□ -0.32
ABCA1O95477 AP001063.1-201ENST00000568332 529 ntBASIC13.03□□□□□ -0.32
ABCA1O95477 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC13.03□□□□□ -0.32
ABCA1O95477 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.03□□□□□ -0.32
ABCA1O95477 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
ABCA1O95477 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
ABCA1O95477 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
ABCA1O95477 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ABCA1O95477 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.03□□□□□ -0.32
ABCA1O95477 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ABCA1O95477 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ABCA1O95477 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ABCA1O95477 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC13.03□□□□□ -0.32
ABCA1O95477 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC13.03□□□□□ -0.32
ABCA1O95477 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ABCA1O95477 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
ABCA1O95477 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
ABCA1O95477 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ABCA1O95477 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
ABCA1O95477 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
ABCA1O95477 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
ABCA1O95477 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
ABCA1O95477 AC004987.2-201ENST00000395959 1148 ntBASIC13.02□□□□□ -0.32
ABCA1O95477 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.02□□□□□ -0.32
ABCA1O95477 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC13.02□□□□□ -0.32
ABCA1O95477 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.02□□□□□ -0.32
ABCA1O95477 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.02□□□□□ -0.32
ABCA1O95477 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.02□□□□□ -0.32
ABCA1O95477 FOS-206ENST00000555347 1280 ntTSL 2 BASIC13.02□□□□□ -0.32
ABCA1O95477 RN7SL190P-201ENST00000582519 257 ntBASIC13.02□□□□□ -0.32
ABCA1O95477 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
ABCA1O95477 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC13.02□□□□□ -0.32
ABCA1O95477 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
ABCA1O95477 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
ABCA1O95477 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
ABCA1O95477 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
ABCA1O95477 BANP-204ENST00000393208 2283 ntTSL 2 BASIC13.02□□□□□ -0.32
ABCA1O95477 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
ABCA1O95477 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
ABCA1O95477 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
ABCA1O95477 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ABCA1O95477 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC13.02□□□□□ -0.32
ABCA1O95477 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC13.02□□□□□ -0.32
ABCA1O95477 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
ABCA1O95477 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
ABCA1O95477 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
ABCA1O95477 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
ABCA1O95477 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
ABCA1O95477 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ABCA1O95477 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC13.02□□□□□ -0.33
ABCA1O95477 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
ABCA1O95477 AC106872.11-201ENST00000605838 421 ntBASIC13.02□□□□□ -0.33
ABCA1O95477 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.02□□□□□ -0.33
ABCA1O95477 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.02□□□□□ -0.33
ABCA1O95477 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.02□□□□□ -0.33
ABCA1O95477 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
ABCA1O95477 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
ABCA1O95477 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ABCA1O95477 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.02□□□□□ -0.33
ABCA1O95477 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
ABCA1O95477 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ABCA1O95477 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.02□□□□□ -0.33
ABCA1O95477 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
ABCA1O95477 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ABCA1O95477 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
ABCA1O95477 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
ABCA1O95477 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
ABCA1O95477 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
ABCA1O95477 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ABCA1O95477 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ABCA1O95477 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ABCA1O95477 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.02□□□□□ -0.33
ABCA1O95477 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
ABCA1O95477 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ABCA1O95477 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.01□□□□□ -0.33
ABCA1O95477 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.01□□□□□ -0.33
ABCA1O95477 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ABCA1O95477 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
ABCA1O95477 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ABCA1O95477 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.01□□□□□ -0.33
ABCA1O95477 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.01□□□□□ -0.33
ABCA1O95477 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.01□□□□□ -0.33
ABCA1O95477 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.01□□□□□ -0.33
ABCA1O95477 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms