Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.47□□□□□ -0.25
CCNKO75909 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CCNKO75909 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.47□□□□□ -0.25
CCNKO75909 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CCNKO75909 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCNKO75909 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCNKO75909 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCNKO75909 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCNKO75909 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CCNKO75909 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CCNKO75909 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
CCNKO75909 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
CCNKO75909 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCNKO75909 WASH3P-207ENST00000560956 1394 ntBASIC13.46□□□□□ -0.25
CCNKO75909 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CCNKO75909 FO538757.1-201ENST00000623083 1397 ntBASIC13.46□□□□□ -0.25
CCNKO75909 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC13.46□□□□□ -0.25
CCNKO75909 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCNKO75909 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
CCNKO75909 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCNKO75909 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
CCNKO75909 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
CCNKO75909 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCNKO75909 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCNKO75909 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
CCNKO75909 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CCNKO75909 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
CCNKO75909 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.46□□□□□ -0.25
CCNKO75909 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCNKO75909 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCNKO75909 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCNKO75909 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCNKO75909 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCNKO75909 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC13.46□□□□□ -0.25
CCNKO75909 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CCNKO75909 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC13.46□□□□□ -0.25
CCNKO75909 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.46□□□□□ -0.25
CCNKO75909 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCNKO75909 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCNKO75909 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.46□□□□□ -0.25
CCNKO75909 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCNKO75909 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.46□□□□□ -0.25
CCNKO75909 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCNKO75909 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.46□□□□□ -0.26
CCNKO75909 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
CCNKO75909 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CCNKO75909 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CCNKO75909 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CCNKO75909 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
CCNKO75909 WASH6P-202ENST00000359512 1437 ntBASIC13.46□□□□□ -0.26
CCNKO75909 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CCNKO75909 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CCNKO75909 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.26
CCNKO75909 AC148477.5-201ENST00000625164 1645 ntBASIC13.46□□□□□ -0.26
CCNKO75909 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CCNKO75909 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CCNKO75909 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
CCNKO75909 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CCNKO75909 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCNKO75909 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCNKO75909 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCNKO75909 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCNKO75909 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CCNKO75909 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCNKO75909 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCNKO75909 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCNKO75909 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCNKO75909 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCNKO75909 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC13.45□□□□□ -0.26
CCNKO75909 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC13.45□□□□□ -0.26
CCNKO75909 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCNKO75909 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CCNKO75909 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.45□□□□□ -0.26
CCNKO75909 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.45□□□□□ -0.26
CCNKO75909 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCNKO75909 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCNKO75909 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
CCNKO75909 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CCNKO75909 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCNKO75909 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CCNKO75909 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CCNKO75909 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC13.45□□□□□ -0.26
CCNKO75909 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCNKO75909 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CCNKO75909 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC13.45□□□□□ -0.26
CCNKO75909 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC13.45□□□□□ -0.26
CCNKO75909 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CCNKO75909 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC13.45□□□□□ -0.26
CCNKO75909 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC13.45□□□□□ -0.26
CCNKO75909 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC13.45□□□□□ -0.26
CCNKO75909 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
CCNKO75909 AP006294.2-201ENST00000641667 209 ntBASIC13.45□□□□□ -0.26
CCNKO75909 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC13.45□□□□□ -0.26
CCNKO75909 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCNKO75909 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCNKO75909 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC13.45□□□□□ -0.26
CCNKO75909 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC13.45□□□□□ -0.26
CCNKO75909 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCNKO75909 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCNKO75909 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms