Protein–RNA interactions for Protein: O75503

CLN5, Ceroid-lipofuscinosis neuronal protein 5, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5O75503 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC12.75□□□□□ -0.37
CLN5O75503 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC12.75□□□□□ -0.37
CLN5O75503 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLN5O75503 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLN5O75503 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLN5O75503 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CLN5O75503 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLN5O75503 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.75□□□□□ -0.37
CLN5O75503 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CLN5O75503 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CLN5O75503 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLN5O75503 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLN5O75503 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC12.74□□□□□ -0.37
CLN5O75503 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CLN5O75503 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CLN5O75503 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC12.74□□□□□ -0.37
CLN5O75503 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CLN5O75503 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
CLN5O75503 AC087481.3-201ENST00000602886 1894 ntBASIC12.74□□□□□ -0.37
CLN5O75503 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLN5O75503 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC12.74□□□□□ -0.37
CLN5O75503 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC12.74□□□□□ -0.37
CLN5O75503 LOX-206ENST00000639739 1626 ntTSL 5 BASIC12.74□□□□□ -0.37
CLN5O75503 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC12.74□□□□□ -0.37
CLN5O75503 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CLN5O75503 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CLN5O75503 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CLN5O75503 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CLN5O75503 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLN5O75503 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLN5O75503 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLN5O75503 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLN5O75503 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLN5O75503 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLN5O75503 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLN5O75503 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLN5O75503 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CLN5O75503 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CLN5O75503 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC12.74□□□□□ -0.37
CLN5O75503 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLN5O75503 RHOQP3-201ENST00000437982 621 ntBASIC12.74□□□□□ -0.37
CLN5O75503 AC093724.1-201ENST00000448659 1027 ntBASIC12.74□□□□□ -0.37
CLN5O75503 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC12.74□□□□□ -0.37
CLN5O75503 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC12.74□□□□□ -0.37
CLN5O75503 AL662844.1-201ENST00000546340 181 ntBASIC12.74□□□□□ -0.37
CLN5O75503 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC12.74□□□□□ -0.37
CLN5O75503 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC12.74□□□□□ -0.37
CLN5O75503 AC010507.1-201ENST00000633895 436 ntBASIC12.74□□□□□ -0.37
CLN5O75503 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLN5O75503 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC12.74□□□□□ -0.37
CLN5O75503 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLN5O75503 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.74□□□□□ -0.37
CLN5O75503 GSN-215ENST00000545652 2428 ntTSL 2 BASIC12.74□□□□□ -0.37
CLN5O75503 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC12.74□□□□□ -0.37
CLN5O75503 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CLN5O75503 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CLN5O75503 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLN5O75503 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLN5O75503 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLN5O75503 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC12.74□□□□□ -0.37
CLN5O75503 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.74□□□□□ -0.37
CLN5O75503 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
CLN5O75503 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC12.74□□□□□ -0.37
CLN5O75503 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CLN5O75503 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CLN5O75503 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLN5O75503 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLN5O75503 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC12.74□□□□□ -0.37
CLN5O75503 SLC6A6P1-201ENST00000413933 1850 ntBASIC12.74□□□□□ -0.37
CLN5O75503 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC12.74□□□□□ -0.37
CLN5O75503 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
CLN5O75503 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CLN5O75503 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CLN5O75503 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLN5O75503 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
CLN5O75503 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CLN5O75503 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
CLN5O75503 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC12.73□□□□□ -0.37
CLN5O75503 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CLN5O75503 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
CLN5O75503 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLN5O75503 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLN5O75503 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLN5O75503 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CLN5O75503 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CLN5O75503 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLN5O75503 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLN5O75503 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLN5O75503 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLN5O75503 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLN5O75503 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLN5O75503 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLN5O75503 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLN5O75503 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLN5O75503 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CLN5O75503 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CLN5O75503 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLN5O75503 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CLN5O75503 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.73□□□□□ -0.37
CLN5O75503 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms