Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
GPC4O75487 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
GPC4O75487 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
GPC4O75487 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
GPC4O75487 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.59■□□□□ 0.09
GPC4O75487 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
GPC4O75487 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
GPC4O75487 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
GPC4O75487 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
GPC4O75487 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
GPC4O75487 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GPC4O75487 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
GPC4O75487 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
GPC4O75487 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.58■□□□□ 0.09
GPC4O75487 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.58■□□□□ 0.09
GPC4O75487 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
GPC4O75487 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
GPC4O75487 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.58■□□□□ 0.09
GPC4O75487 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
GPC4O75487 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
GPC4O75487 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
GPC4O75487 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
GPC4O75487 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
GPC4O75487 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
GPC4O75487 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.58■□□□□ 0.08
GPC4O75487 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
GPC4O75487 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
GPC4O75487 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
GPC4O75487 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
GPC4O75487 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
GPC4O75487 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
GPC4O75487 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.58■□□□□ 0.08
GPC4O75487 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.58■□□□□ 0.08
GPC4O75487 AL512361.1-201ENST00000554200 418 ntBASIC15.58■□□□□ 0.08
GPC4O75487 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.58■□□□□ 0.08
GPC4O75487 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.58■□□□□ 0.08
GPC4O75487 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.58■□□□□ 0.08
GPC4O75487 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.58■□□□□ 0.08
GPC4O75487 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
GPC4O75487 AC106028.4-201ENST00000614509 607 ntBASIC15.58■□□□□ 0.08
GPC4O75487 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
GPC4O75487 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
GPC4O75487 AC087499.5-201ENST00000452760 1342 ntBASIC15.58■□□□□ 0.08
GPC4O75487 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
GPC4O75487 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
GPC4O75487 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
GPC4O75487 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
GPC4O75487 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
GPC4O75487 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.58■□□□□ 0.08
GPC4O75487 AC100757.3-201ENST00000622361 1406 ntBASIC15.58■□□□□ 0.08
GPC4O75487 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
GPC4O75487 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
GPC4O75487 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.58■□□□□ 0.08
GPC4O75487 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
GPC4O75487 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.58■□□□□ 0.08
GPC4O75487 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
GPC4O75487 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
GPC4O75487 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
GPC4O75487 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
GPC4O75487 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
GPC4O75487 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.57■□□□□ 0.08
GPC4O75487 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.57■□□□□ 0.08
GPC4O75487 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
GPC4O75487 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GPC4O75487 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
GPC4O75487 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
GPC4O75487 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
GPC4O75487 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GPC4O75487 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
GPC4O75487 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
GPC4O75487 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.57■□□□□ 0.08
GPC4O75487 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
GPC4O75487 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GPC4O75487 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
GPC4O75487 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.57■□□□□ 0.08
GPC4O75487 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GPC4O75487 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
GPC4O75487 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GPC4O75487 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.57■□□□□ 0.08
GPC4O75487 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.57■□□□□ 0.08
GPC4O75487 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.57■□□□□ 0.08
GPC4O75487 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.57■□□□□ 0.08
GPC4O75487 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.57■□□□□ 0.08
GPC4O75487 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.57■□□□□ 0.08
GPC4O75487 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
GPC4O75487 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.57■□□□□ 0.08
GPC4O75487 AC010336.2-201ENST00000564226 506 ntBASIC15.57■□□□□ 0.08
GPC4O75487 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
GPC4O75487 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
GPC4O75487 AL390955.2-201ENST00000603032 514 ntBASIC15.57■□□□□ 0.08
GPC4O75487 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.57■□□□□ 0.08
GPC4O75487 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.57■□□□□ 0.08
GPC4O75487 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.57■□□□□ 0.08
GPC4O75487 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GPC4O75487 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.57■□□□□ 0.08
GPC4O75487 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.57■□□□□ 0.08
GPC4O75487 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
GPC4O75487 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GPC4O75487 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
GPC4O75487 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms