Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ZNF253O75346 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC12.15□□□□□ -0.46
ZNF253O75346 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ZNF253O75346 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ZNF253O75346 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
ZNF253O75346 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC12.15□□□□□ -0.46
ZNF253O75346 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ZNF253O75346 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
ZNF253O75346 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
ZNF253O75346 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
ZNF253O75346 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC12.15□□□□□ -0.47
ZNF253O75346 AC006504.5-208ENST00000588784 2401 ntBASIC12.15□□□□□ -0.47
ZNF253O75346 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF253O75346 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
ZNF253O75346 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF253O75346 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF253O75346 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF253O75346 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC12.14□□□□□ -0.47
ZNF253O75346 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF253O75346 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC12.14□□□□□ -0.47
ZNF253O75346 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF253O75346 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF253O75346 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
ZNF253O75346 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF253O75346 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF253O75346 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC12.14□□□□□ -0.47
ZNF253O75346 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.14□□□□□ -0.47
ZNF253O75346 AC131212.3-201ENST00000624087 4219 ntBASIC12.14□□□□□ -0.47
ZNF253O75346 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF253O75346 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF253O75346 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF253O75346 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF253O75346 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
ZNF253O75346 CSF3-203ENST00000394148 622 ntTSL 3 BASIC12.14□□□□□ -0.47
ZNF253O75346 AL645939.2-201ENST00000427340 991 ntBASIC12.14□□□□□ -0.47
ZNF253O75346 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF253O75346 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC12.14□□□□□ -0.47
ZNF253O75346 AC079781.3-201ENST00000449110 356 ntBASIC12.14□□□□□ -0.47
ZNF253O75346 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC12.14□□□□□ -0.47
ZNF253O75346 AC105233.2-201ENST00000523697 349 ntBASIC12.14□□□□□ -0.47
ZNF253O75346 AF228730.5-201ENST00000530288 346 ntBASIC12.14□□□□□ -0.47
ZNF253O75346 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC12.14□□□□□ -0.47
ZNF253O75346 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC12.14□□□□□ -0.47
ZNF253O75346 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
ZNF253O75346 Z83851.2-201ENST00000609564 659 ntBASIC12.14□□□□□ -0.47
ZNF253O75346 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC12.14□□□□□ -0.47
ZNF253O75346 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC12.14□□□□□ -0.47
ZNF253O75346 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF253O75346 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF253O75346 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC12.14□□□□□ -0.47
ZNF253O75346 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
ZNF253O75346 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF253O75346 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC12.14□□□□□ -0.47
ZNF253O75346 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF253O75346 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.14□□□□□ -0.47
ZNF253O75346 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF253O75346 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF253O75346 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.14□□□□□ -0.47
ZNF253O75346 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF253O75346 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
ZNF253O75346 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC12.14□□□□□ -0.47
ZNF253O75346 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.14□□□□□ -0.47
ZNF253O75346 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF253O75346 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC12.14□□□□□ -0.47
ZNF253O75346 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF253O75346 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF253O75346 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF253O75346 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF253O75346 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF253O75346 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF253O75346 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
ZNF253O75346 MROH4P-201ENST00000431302 1578 ntBASIC12.13□□□□□ -0.47
ZNF253O75346 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC12.13□□□□□ -0.47
ZNF253O75346 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC12.13□□□□□ -0.47
ZNF253O75346 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF253O75346 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF253O75346 REM2-202ENST00000536884 1331 ntTSL 2 BASIC12.13□□□□□ -0.47
ZNF253O75346 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
ZNF253O75346 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF253O75346 AC025580.3-201ENST00000617932 1424 ntBASIC12.13□□□□□ -0.47
ZNF253O75346 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF253O75346 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF253O75346 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF253O75346 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF253O75346 AC126365.1-201ENST00000578585 1514 ntBASIC12.13□□□□□ -0.47
ZNF253O75346 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC12.13□□□□□ -0.47
ZNF253O75346 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF253O75346 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
ZNF253O75346 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF253O75346 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF253O75346 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF253O75346 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC12.13□□□□□ -0.47
ZNF253O75346 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.13□□□□□ -0.47
ZNF253O75346 AMT-204ENST00000427987 1646 ntTSL 5 BASIC12.13□□□□□ -0.47
ZNF253O75346 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC12.13□□□□□ -0.47
ZNF253O75346 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF253O75346 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC12.13□□□□□ -0.47
ZNF253O75346 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC12.13□□□□□ -0.47
ZNF253O75346 AL662844.1-201ENST00000546340 181 ntBASIC12.13□□□□□ -0.47
ZNF253O75346 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms