Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
ACTN4O43707 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC17.36■□□□□ 0.37
ACTN4O43707 SLC9A7P1-202ENST00000556476 2239 ntBASIC17.36■□□□□ 0.37
ACTN4O43707 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ACTN4O43707 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
ACTN4O43707 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC17.36■□□□□ 0.37
ACTN4O43707 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.36■□□□□ 0.37
ACTN4O43707 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
ACTN4O43707 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
ACTN4O43707 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.36■□□□□ 0.37
ACTN4O43707 TREML5P-201ENST00000421694 576 ntBASIC17.36■□□□□ 0.37
ACTN4O43707 TSSK5P-201ENST00000423978 907 ntBASIC17.36■□□□□ 0.37
ACTN4O43707 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.36■□□□□ 0.37
ACTN4O43707 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.36■□□□□ 0.37
ACTN4O43707 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.36■□□□□ 0.37
ACTN4O43707 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.36■□□□□ 0.37
ACTN4O43707 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.36■□□□□ 0.37
ACTN4O43707 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.36■□□□□ 0.37
ACTN4O43707 AL590560.3-201ENST00000623350 461 ntBASIC17.36■□□□□ 0.37
ACTN4O43707 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.36■□□□□ 0.37
ACTN4O43707 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ACTN4O43707 AL136379.1-201ENST00000623471 2642 ntBASIC17.36■□□□□ 0.37
ACTN4O43707 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC17.36■□□□□ 0.37
ACTN4O43707 AC232323.1-201ENST00000540724 2099 ntBASIC17.36■□□□□ 0.37
ACTN4O43707 REXO1L5P-201ENST00000622260 2098 ntBASIC17.36■□□□□ 0.37
ACTN4O43707 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC17.36■□□□□ 0.37
ACTN4O43707 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ACTN4O43707 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ACTN4O43707 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ACTN4O43707 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC17.36■□□□□ 0.37
ACTN4O43707 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC17.36■□□□□ 0.37
ACTN4O43707 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ACTN4O43707 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ACTN4O43707 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ACTN4O43707 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
ACTN4O43707 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ACTN4O43707 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ACTN4O43707 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
ACTN4O43707 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
ACTN4O43707 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ACTN4O43707 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
ACTN4O43707 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
ACTN4O43707 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
ACTN4O43707 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC17.35■□□□□ 0.37
ACTN4O43707 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ACTN4O43707 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
ACTN4O43707 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC17.35■□□□□ 0.37
ACTN4O43707 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ACTN4O43707 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.35■□□□□ 0.37
ACTN4O43707 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.35■□□□□ 0.37
ACTN4O43707 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.35■□□□□ 0.37
ACTN4O43707 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ACTN4O43707 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.35■□□□□ 0.37
ACTN4O43707 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.35■□□□□ 0.37
ACTN4O43707 AC004461.2-201ENST00000629517 803 ntBASIC17.35■□□□□ 0.37
ACTN4O43707 AC079781.4-201ENST00000641908 219 ntBASIC17.35■□□□□ 0.37
ACTN4O43707 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ACTN4O43707 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ACTN4O43707 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.35■□□□□ 0.37
ACTN4O43707 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.35■□□□□ 0.37
ACTN4O43707 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ACTN4O43707 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ACTN4O43707 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ACTN4O43707 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
ACTN4O43707 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ACTN4O43707 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ACTN4O43707 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ACTN4O43707 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ACTN4O43707 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ACTN4O43707 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
ACTN4O43707 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ACTN4O43707 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ACTN4O43707 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ACTN4O43707 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
ACTN4O43707 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ACTN4O43707 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ACTN4O43707 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ACTN4O43707 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
ACTN4O43707 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
ACTN4O43707 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
ACTN4O43707 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
ACTN4O43707 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ACTN4O43707 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ACTN4O43707 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ACTN4O43707 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ACTN4O43707 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC17.34■□□□□ 0.37
ACTN4O43707 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17.34■□□□□ 0.37
ACTN4O43707 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ACTN4O43707 AC114501.2-201ENST00000439631 535 ntBASIC17.34■□□□□ 0.37
ACTN4O43707 AC009477.1-201ENST00000452936 217 ntBASIC17.34■□□□□ 0.37
ACTN4O43707 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.34■□□□□ 0.37
ACTN4O43707 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ACTN4O43707 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
ACTN4O43707 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.34■□□□□ 0.37
ACTN4O43707 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ACTN4O43707 AC092337.1-201ENST00000568699 1129 ntBASIC17.34■□□□□ 0.37
ACTN4O43707 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
ACTN4O43707 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ACTN4O43707 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.34■□□□□ 0.37
ACTN4O43707 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms